RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
PMS1-221ENST00000624204 SPOCK1Q08629 439 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 LINC01590Q5TEZ4 76 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 KIRREL2Q6UWL6 708 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 SLC25A42Q86VD7 318 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 OR10H5Q8NGA6 315 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 SLC22A13Q9Y226 551 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 WIF1Q9Y5W5 379 aa13.71□□□□□ -0.21
PMS1-221ENST00000624204 SNRNP200O75643 2136 aaKnown RBP13.71□□□□□ -0.21
PMS1-221ENST00000624204 DCTN6O00399 190 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 SPINT1O43278 529 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 MBTPS2O43462 519 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 ZNF124Q15973 351 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 SLC35D3Q5M8T2 416 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 METRNLQ641Q3 311 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 STX12Q86Y82 276 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 ZNF383Q8NA42 475 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 OR10G6Q8NH81 332 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 MEGF10Q96KG7 1140 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 PRRT1Q99946 306 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 PIGQQ9BRB3 760 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 KCNG2Q9UJ96 466 aa13.71□□□□□ -0.22
PMS1-221ENST00000624204 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 H0YIZ8 118 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 IFNA6P05013 189 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 MELTFP08582 738 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 CSRP1P21291 193 aaKnown RBP13.7□□□□□ -0.22
PMS1-221ENST00000624204 DPY19L2P2Q6ZN68 376 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 SLC16A9Q7RTY1 509 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 ST7LQ8TDW4 575 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 SLAMF9Q96A28 289 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 EGLN1Q9GZT9 426 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 WDR76Q9H967 626 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 TREM2Q9NZC2 230 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 URGCP-MRPS24S4R325 110 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 TMEM212A6NML5 194 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 ADAP1O75689 374 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 SRSF4Q08170 494 aaKnown RBP13.7□□□□□ -0.22
PMS1-221ENST00000624204 PMPCAQ10713 525 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 MLF2Q15773 248 aaPredicted RBP13.7□□□□□ -0.22
PMS1-221ENST00000624204 ZNF684Q5T5D7 378 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 ZNF563Q8TA94 476 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 RPS4Y2Q8TD47 263 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 RNF126Q9BV68 326 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 STARD5Q9NSY2 213 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 C11orf98E9PRG8 122 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 IGHV2-5P01817 119 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 S100A2P29034 98 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 PPICP45877 212 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 NAAAQ02083 359 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 NFATC4Q14934 902 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 TMEM244Q5VVB8 128 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 RPL7L1Q6DKI1 246 aaKnown RBP13.7□□□□□ -0.22
PMS1-221ENST00000624204 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
PMS1-221ENST00000624204 PRSS35Q8N3Z0 413 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 OR4N2Q8NGD1 307 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 AKR7LQ8NHP1 331 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 ARRDC3Q96B67 414 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 ZDHHC12Q96GR4 267 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 OCSTAMPQ9BR26 566 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 SPHK2Q9NRA0 654 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 OR5AC2Q9NZP5 309 aa13.7□□□□□ -0.22
PMS1-221ENST00000624204 TRBV5-7A0A0A0MS05 114 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 A0A1W2PPE2 198 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 HOXA2O43364 376 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SOD2P04179 222 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 OR8U9P0C7N5 309 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 HTR2CP28335 458 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 RAB5CP51148 216 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SSBP1Q04837 148 aaKnown RBP13.69□□□□□ -0.22
PMS1-221ENST00000624204 ZNF616Q08AN1 781 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 WDR38Q5JTN6 314 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 Q6ZRG5 221 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 OR8U1Q8NH10 309 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 TRIM2Q9C040 744 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 TAF9BQ9HBM6 251 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
PMS1-221ENST00000624204 H7C1Q1 480 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 MFNGO00587 321 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SFTPBP07988 381 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 GSK3AP49840 483 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SCAND1P57086 179 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 HGFACQ04756 655 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
PMS1-221ENST00000624204 PYY3Q5JQD4 70 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 DRAM2Q6UX65 266 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 TRAPPC6BQ86SZ2 158 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 TCEAL8Q8IYN2 117 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SLC41A2Q96JW4 573 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 SPACA1Q9HBV2 294 aa13.69□□□□□ -0.22
PMS1-221ENST00000624204 RPS4Y1P22090 263 aaKnown RBP13.68□□□□□ -0.22
PMS1-221ENST00000624204 HRH1P35367 487 aa13.68□□□□□ -0.22
PMS1-221ENST00000624204 ALG11Q2TAA5 492 aa13.68□□□□□ -0.22
PMS1-221ENST00000624204 OR2L3Q8NG85 312 aa13.68□□□□□ -0.22
PMS1-221ENST00000624204 SUSD6Q92537 303 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms