RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RNF4P78317 190 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 C17orf67Q0P5P2 114 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 MELKQ14680 651 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 UBXN2BQ14CS0 331 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 PRAMEF17Q5VTA0 474 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 TSSK4Q6SA08 328 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 H1FNTQ75WM6 255 aaPredicted RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 COX15Q7KZN9 410 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 MDGA2Q7Z553 956 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 C12orf45Q8N5I9 185 aaPredicted RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 NKAIN3Q8N8D7 197 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 NFAM1Q8NET5 270 aaPredicted RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 OR13C3Q8NGS6 347 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 SCARB1Q8WTV0 552 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 ZNF501Q96CX3 271 aaPredicted RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 FOXN4Q96NZ1 517 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 POTEKPQ9BYX7 375 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 OR11A1Q9GZK7 315 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 NARFLQ9H6Q4 476 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 EXO5Q9H790 373 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 CHST11Q9NPF2 352 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 MKL2Q9ULH7 1088 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 GTF2A1LQ9UNN4 478 aa8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 MRPS18BQ9Y676 258 aaKnown RBP8.61□□□□□ -1.03
IGHV3-54-201ENST00000622166 A0A1B0GTI1 187 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 LOC107986453A0A1B0GWG9 222 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 TMEM82A0PJX8 343 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 MFSD2BA6NFX1 497 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RFPL4AA6NLU0 287 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 NPIPA5E9PKD4 350 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RFPL4AL1F8VTS6 287 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 H3BSH0 61 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 SOX1O00570 391 aaPredicted RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 GOSR2O14653 212 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RAD1O60671 282 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RP2O75695 350 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 MPZL1O95297 269 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 SIX6O95475 246 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 UBCP0CG48 685 aaKnown RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 HLA-DOBP13765 273 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 MSX1P28360 303 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 HSD11B1P28845 292 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 CSNK1EP49674 416 aaKnown RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 GMFBP60983 142 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 PMPCAQ10713 525 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 ZMYND11Q15326 602 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 SLC25A53Q5H9E4 307 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 GLYATL3Q5SZD4 288 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 OTPQ5XKR4 325 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RAB12Q6IQ22 244 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 TMEM65Q6PI78 240 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 WDR74Q6RFH5 385 aaPredicted RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 LANCL3Q6ZV70 420 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 NUBPLQ8TB37 319 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RNF133Q8WVZ7 376 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 DVL3Q92997 716 aaPredicted RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 CHST6Q9GZX3 395 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 SLC22A11Q9NSA0 550 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 MED11Q9P086 117 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 FBLN5Q9UBX5 448 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 CGGBP1Q9UFW8 167 aaPredicted RBP8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 RAB22AQ9UL26 194 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 NPIPA1Q9UND3 350 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 SRPK3Q9UPE1 567 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 EMC9Q9Y3B6 208 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 MTCH2Q9Y6C9 303 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 CEP192Q8TEP8 1941 aa8.6□□□□□ -1.03
IGHV3-54-201ENST00000622166 IGLV3-32A0A0A0MS00 114 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 TRAV14DV4A0A0A6YYC5 116 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 A0A1W2PNV4 684 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 MEIS3P1A6NDR6 274 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 TMEM200CA6NKL6 621 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 DISC1C4P0D8 188 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 SDC3O75056 442 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 SCGNO76038 276 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 CD8AP01732 235 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 NMBP08949 121 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 H2BFMP0C1H6 154 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 OR4E1P0C645 316 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 ACSM4P0C7M7 580 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 ATXN8OSP0DMR3 200 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 GLB1P16278 677 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 HLA-GP17693 338 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 POU3F2P20265 443 aaPredicted RBP8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 IL11P20809 199 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 ZP3P21754 424 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 GSK3AP49840 483 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 MMP16P51512 607 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 HSF1Q00613 529 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 GK2Q14410 553 aaPredicted RBP8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 MEF2DQ14814 521 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 ZNF260Q3ZCT1 412 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 LY6G6FQ5SQ64 297 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 CLVS2Q5SYC1 327 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 SFRP5Q5T4F7 317 aa8.59□□□□□ -1.03
IGHV3-54-201ENST00000622166 ATPAF1Q5TC12 328 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms