RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 CRYBA1P05813 215 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 FABP1P07148 127 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 B4GALT1P15291 398 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 AADACP22760 399 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 DLX5P56178 289 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ACSM1Q08AH1 577 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF74Q16587 644 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 LAIR1Q6GTX8 287 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 TMPRSS7Q7RTY8 843 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF573Q86YE8 665 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 OR10K1Q8NGX5 313 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
CLIP1-219ENST00000620786 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-219ENST00000620786 OR2W5A6NFC9 320 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 TGM6O95932 706 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 PCSK6P29122 969 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 MRPS34P82930 218 aaKnown RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 PEA15Q15121 130 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 CMPK2Q5EBM0 449 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 FAM109BQ6ICB4 259 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OR2A1Q8NGT9 310 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF419Q96HQ0 510 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 C1QTNF3Q9BXJ4 246 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 S1PR5Q9H228 398 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ZMAT3Q9HA38 289 aaKnown RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 SERGEFQ9UGK8 458 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OSGIN1Q9UJX0 560 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ANKRD61A6NGH8 418 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 UPK1AO00322 258 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 PPM1DO15297 605 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 COL9A1P20849 921 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 EPHA8P29322 1005 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 SYT14P1Q58G82 188 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 PFDN5Q99471 154 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 NUDT9Q9BW91 350 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 EXO1Q9UQ84 846 aaKnown RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ECI1P42126 302 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 GPR12P47775 334 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 RTL8BQ17RB0 113 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 IL34Q6ZMJ4 242 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 CYP4V2Q6ZWL3 525 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OR1M1Q8NGA1 313 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 SLCO1B1Q9Y6L6 691 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 TRBV5-4A0A0C4DH59 114 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 FBXO24O75426 580 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 NRASP01111 189 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 POLR2IP36954 125 aaKnown RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 WIPI1Q5MNZ9 446 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OR1L3Q8NH93 324 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 AQP7O14520 342 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 FOLR1P15328 257 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 DBPQ10586 325 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-219ENST00000620786 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 NAA40Q86UY6 237 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ZDHHC23Q8IYP9 409 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 ARIH2OSQ8N7S6 290 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OR52N1Q8NH53 320 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OR56B4Q8NH76 319 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 OPALINQ96PE5 141 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 PPP1R3CQ9UQK1 317 aa10.35□□□□□ -0.75
CLIP1-219ENST00000620786 MEIKINA0A087WXM9 373 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 KIR2DS1A0A191URI9 304 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SPI1P17947 270 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 KIR2DS4P43632 304 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 NKX6-1P78426 367 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 KIR2DS1Q14954 304 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 PRAMEF5Q5TYX0 476 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 PRAMEF6Q5VXH4 476 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF546Q86UE3 836 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 HPSE2Q8WWQ2 592 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TTC9Q92623 222 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SULT1B1O43704 296 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 YIF1AO95070 293 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 NPBWR1P48145 328 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 LSAMPQ13449 338 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 HABP2Q14520 560 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 STEAP1BQ6NZ63 245 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TMEM217Q8N7C4 229 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TEAD3Q99594 435 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF701M0R085 212 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SPRY3O43610 288 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SERPINF1P36955 418 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 NPY4RP50391 375 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SSPNQ14714 243 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ZNF626Q68DY1 528 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 PLXDC2Q6UX71 529 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 OR51H1Q8NH63 302 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 GINS3Q9BRX5 216 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 TINAGL1Q9GZM7 467 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-219ENST00000620786 HRH4Q9H3N8 390 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 NARFLQ9H6Q4 476 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 FN3KRPQ9HA64 309 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 SPACA1Q9HBV2 294 aa10.34□□□□□ -0.75
CLIP1-219ENST00000620786 ATPIF1Q9UII2 106 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms