RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 ARFGEF3Q5TH69 2177 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 PRR32B1ATL7 298 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 H0YAE9 185 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 IGKV3-15P01624 115 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 SPARCP09486 303 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 CECR9P0C854 216 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 APEX1P27695 318 aaKnown RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 LSM6P62312 80 aaKnown RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 BSPH1Q075Z2 132 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 CCDC92Q53HC0 331 aaPredicted RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 SLC18B1Q6NT16 456 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 OR6N2Q8NGY6 317 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
NEK3-210ENST00000620675 PLPPR2Q96GM1 343 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 OR2H1Q9GZK4 316 aa11.85□□□□□ -0.51
NEK3-210ENST00000620675 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 UBL3O95164 117 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 IGLV1-44P01699 117 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 HRGP04196 525 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
NEK3-210ENST00000620675 CBR1P16152 277 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 ANOS1P23352 680 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 ENTPD1P49961 510 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 SLC36A2Q495M3 483 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 SPATC1Q76KD6 591 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 DEPDC4Q8N2C3 294 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 OR4F15Q8NGB8 312 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 OR51G2Q8NGK0 314 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 APOL4Q9BPW4 351 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 CCNB1IP1Q9NPC3 277 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 PNRC2Q9NPJ4 139 aaKnown RBP11.84□□□□□ -0.51
NEK3-210ENST00000620675 CRNNQ9UBG3 495 aaPredicted RBP11.84□□□□□ -0.51
NEK3-210ENST00000620675 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
NEK3-210ENST00000620675 COPS3Q9UNS2 423 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 MOKQ9UQ07 419 aa11.84□□□□□ -0.51
NEK3-210ENST00000620675 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
NEK3-210ENST00000620675 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 ADRA2AP08913 450 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 DBHP09172 617 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 COX6B1P14854 86 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 HTR1FP30939 366 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 CALCRP30988 508 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 AQP6Q13520 282 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 OCLNQ16625 522 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 PCK2Q16822 640 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 SLC35D3Q5M8T2 416 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 VASH1Q7L8A9 365 aaPredicted RBP11.83□□□□□ -0.51
NEK3-210ENST00000620675 DCXRQ7Z4W1 244 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 FAM222BQ8WU58 562 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 NEUROG1Q92886 237 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 PIK3IP1Q96FE7 263 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 OBP2BQ9NPH6 170 aa11.83□□□□□ -0.51
NEK3-210ENST00000620675 H2AFY2Q9P0M6 372 aaPredicted RBP11.83□□□□□ -0.51
NEK3-210ENST00000620675 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 MAGEB4O15481 346 aaPredicted RBP11.83□□□□□ -0.52
NEK3-210ENST00000620675 ZNF823P16415 610 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 CD40P25942 277 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 HIST1H3AP68431 136 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 CDK5R2Q13319 367 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 RSPO1Q2MKA7 263 aaPredicted RBP11.83□□□□□ -0.52
NEK3-210ENST00000620675 HIST2H3PS2Q5TEC6 136 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 ADAM5Q6NVV9 412 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 HIST2H3AQ71DI3 136 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 GID4Q8IVV7 300 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 C8orf59Q8N0T1 100 aaPredicted RBP11.83□□□□□ -0.52
NEK3-210ENST00000620675 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 TIMM10BQ9Y5J6 103 aa11.83□□□□□ -0.52
NEK3-210ENST00000620675 ABCD4O14678 606 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 DOK2O60496 412 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 RAB36O95755 333 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 SERPINA5P05154 406 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 PRF1P14222 555 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 HGFACQ04756 655 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 NCMAPQ5T1S8 102 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 SSX6Q7RTT6 188 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 CCDC36Q8IYA8 594 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 NANOS1Q8WY41 292 aaKnown RBP11.82□□□□□ -0.52
NEK3-210ENST00000620675 TBX5Q99593 518 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 ZNF184Q99676 751 aaPredicted RBP11.82□□□□□ -0.52
NEK3-210ENST00000620675 USB1Q9BQ65 265 aaKnown RBP11.82□□□□□ -0.52
NEK3-210ENST00000620675 CDADC1Q9BWV3 514 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 PLEK2Q9NYT0 353 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 PDZD2O15018 2839 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 SLC22A31A6NKX4 558 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 A6NNC1 897 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 ATP6V1G2-DDX39BF2Z307 99 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 PSMD9O00233 223 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 CASKO14936 926 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 SGCEO43556 437 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 SYNGR3O43761 229 aa11.82□□□□□ -0.52
NEK3-210ENST00000620675 XPNPEP2O43895 674 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms