RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	LHFPL6	Q9Y693	200 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	NCOA6	Q14686	2063 aa	Predicted RBP	11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DSP	P15924	2871 aa	Known RBP	11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	NPIPB13	A6NJU9	1138 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	NPIPB4	C9JG80	1138 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PHYH	O14832	338 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PIN1P1	O15428	100 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SERPINA3	P01011	423 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PTGS2	P35354	604 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	RTP5	Q14D33	572 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CCDC58	Q4VC31	144 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DMRTC1	Q5HYR2	192 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DDI2	Q5TDH0	399 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	HDDC2	Q7Z4H3	204 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	KCTD20	Q7Z5Y7	419 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	LUZP2	Q86TE4	346 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ST7L	Q8TDW4	575 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ASB17	Q8WXJ9	295 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TMEM106A	Q96A25	262 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SH3GL3	Q99963	347 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SLC30A2	Q9BRI3	323 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	KCNMB2	Q9Y691	235 aa		11.74	□□□□□ -0.53
CYFIP2-222	ENST00000620254	OR4C45	A6NMZ5	311 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZNF879	B4DU55	563 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SYNGR4	O95473	234 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	HPN	P05981	417 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	B4GALT1	P15291	398 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZNF24	P17028	368 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	RAB3B	P20337	219 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	HSD11B1	P28845	292 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CLDN18	P56856	261 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SLC25A47	Q6Q0C1	308 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SNIP1	Q8TAD8	396 aa	Known RBP	11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CEP78	Q5JTW2	689 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PDSS1	Q5T2R2	415 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	GPR137C	Q8N3F9	429 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	FAM117A	Q9C073	453 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	NXF2	Q9GZY0	626 aa	Known RBP	11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MIXL1	Q9H2W2	232 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	C1orf198	Q9H425	327 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	FANCF	Q9NPI8	374 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SLC5A6	Q9Y289	635 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	P2RY10	O00398	339 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TRAM1	Q15629	374 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SFXN4	Q6P4A7	337 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	KLHL24	Q6TFL4	600 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TUSC5	Q8IXB3	177 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	AP3S1	Q92572	193 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CPNE4	Q96A23	557 aa	Predicted RBP	11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ATF6B	Q99941	703 aa		11.73	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TRGV5	A0A0B4J1U4	118 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZNF716	A6NP11	495 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DLL1	O00548	723 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DHH	O43323	396 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ARL6IP5	O75915	188 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SNRPB	P14678	240 aa	Known RBP	11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CD40LG	P29965	261 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	EIF2S3	P41091	472 aa	Known RBP	11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CAPZA2	P47755	286 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MTNR1B	P49286	362 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PSMD7	P51665	324 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TAB1	Q15750	504 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	RNASE12	Q5GAN4	147 aa	Known RBP	11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SAMD12	Q8N8I0	201 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	OR10S1	Q8NGN2	331 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	DERL3	Q96Q80	235 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MNT	Q99583	582 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	C12orf49	Q9H741	205 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CYB5R1	Q9UHQ9	305 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	NOSIP	Q9Y314	301 aa	Known RBP	11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254		F5H5K5	113 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SLC6A9	P48067	706 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MCEMP1	Q8IX19	187 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TMEM123	Q8N131	208 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	FAM109A	Q8N4B1	249 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZNF454	Q8N9F8	522 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZFP62	Q8NB50	900 aa	Predicted RBP	11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	OR5M9	Q8NGP3	310 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ZNF671	Q8TAW3	534 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	RNF128	Q8TEB7	428 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	TCF7L1	Q9HCS4	588 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	KLHL9	Q9P2J3	617 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	GPRIN2	O60269	458 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	LMX1B	O60663	402 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	UBE2J2	Q8N2K1	259 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SPRR3	Q9UBC9	169 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PTPRQ	Q9UMZ3	2332 aa		11.72	□□□□□ -0.53
CYFIP2-222	ENST00000620254		A0A075B6Q4	140 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	FABP12	A6NFH5	140 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SLC43A1	O75387	559 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	SRM	P19623	302 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254		Q499Y3	187 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	YIF1B	Q5BJH7	314 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	PNPLA2	Q96AD5	504 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MED18	Q9BUE0	208 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	MCTS1	Q9ULC4	181 aa	Known RBP	11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	GLS	O94925	669 aa	Predicted RBP	11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	ANOS1	P23352	680 aa		11.71	□□□□□ -0.53
CYFIP2-222	ENST00000620254	CEACAM16	Q2WEN9	425 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms