RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
NEK3-208ENST00000618534 PDCD10Q9BUL8 212 aa18.32■□□□□ 0.52
NEK3-208ENST00000618534 GPN3Q9UHW5 284 aaPredicted RBP18.32■□□□□ 0.52
NEK3-208ENST00000618534 A0A1B0GW55 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 FRG2CA6NGY1 282 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DNASE2O00115 360 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 SLC25A12O75746 678 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 MPZL1O95297 269 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L2P0CJ85 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L3P0CJ86 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L4P0CJ87 422 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L5P0CJ88 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L6P0CJ89 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4L7P0CJ90 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 GABRG2P18507 467 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 ATXN7L3Q14CW9 347 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 TSLPQ969D9 159 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 SEC22AQ96IW7 307 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 ZNF587Q96SQ5 575 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 VRK1Q99986 396 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 MTIF3Q9H2K0 278 aaKnown RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 DUX4Q9UBX2 424 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 FITM1A5D6W6 292 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 LDLRAD4O15165 306 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 THEGLP0DJG4 465 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 RORAP35398 523 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 GABRA4P48169 554 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 STARP49675 285 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 TAF13Q15543 124 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 COL13A1Q5TAT6 717 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 C11orf87Q6NUJ2 197 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 CORO6Q6QEF8 472 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 MOB3CQ70IA8 216 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 TMEM151BQ8IW70 566 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 OR13C3Q8NGS6 347 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 LRRC46Q96FV0 321 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 SLCO5A1Q9H2Y9 848 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 LANCL2Q9NS86 450 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 TAS2R3Q9NYW6 316 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 VSX1Q9NZR4 365 aaPredicted RBP18.31■□□□□ 0.52
NEK3-208ENST00000618534 VSIG4Q9Y279 399 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 EMC9Q9Y3B6 208 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 FREM3P0C091 2139 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 KIF26BQ2KJY2 2108 aa18.31■□□□□ 0.52
NEK3-208ENST00000618534 BCL2L11O43521 198 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 LMX1BO60663 402 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 DNASE1L1P49184 302 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 DEFA5Q01523 94 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 PAPD4Q6PIY7 484 aaKnown RBP18.3■□□□□ 0.52
NEK3-208ENST00000618534 CD163Q86VB7 1156 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 ACBD4Q8NC06 268 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 OR52N5Q8NH56 324 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 NKD1Q969G9 470 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 ADIPOR1Q96A54 375 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 IFT46Q9NQC8 304 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 PLCL2Q9UPR0 1127 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 LOC100509620A0A075B734 347 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 WDPCPO95876 746 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 PLATP00750 562 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 IL32P24001 234 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 ARHGDIBP52566 201 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 SRSF4Q08170 494 aaKnown RBP18.3■□□□□ 0.52
NEK3-208ENST00000618534 ZNF345Q14585 488 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 LIN54Q6MZP7 749 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 ZBTB8AQ96BR9 441 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 DNTTIP1Q9H147 329 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 TXNIPQ9H3M7 391 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 SOHLH2Q9NX45 425 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 SLCO1B1Q9Y6L6 691 aa18.3■□□□□ 0.52
NEK3-208ENST00000618534 CPAMD8Q8IZJ3 1885 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 PCNX3Q9H6A9 2034 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 MYO9BQ13459 2157 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 ARPC4-TTLL3A0A0A6YYG9 625 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 LOC107986453A0A1B0GWG9 222 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 RNF222A6NCQ9 220 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 OR2F2O95006 317 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 CD37P11049 281 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 IL12BP29460 328 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 PPM1FP49593 454 aaPredicted RBP18.29■□□□□ 0.52
NEK3-208ENST00000618534 ATP1B3P54709 279 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 OR2F1Q13607 317 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 LPCAT3Q6P1A2 487 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 C3orf33Q6P1S2 294 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 ZNF584Q8IVC4 421 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 BPIFCQ8NFQ6 507 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 ZNF285Q96NJ3 590 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 NUDT9Q9BW91 350 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 ZNF471Q9BX82 626 aaPredicted RBP18.29■□□□□ 0.52
NEK3-208ENST00000618534 COMMD9Q9P000 198 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 FAM74A7A6NL05 159 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 SRSF10O75494 262 aaKnown RBP18.29■□□□□ 0.52
NEK3-208ENST00000618534 SLC25A4P12235 298 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 DLSTP36957 453 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 FAM74A3Q4VXF1 159 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 C7orf61Q8IZ16 206 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 OR4D6Q8NGJ1 314 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 PPP1R1CQ8WVI7 109 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 LRRC61Q9BV99 259 aa18.29■□□□□ 0.52
NEK3-208ENST00000618534 HHLA2Q9UM44 414 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms