RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ZNF248	Q8NDW4	579 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MSANTD3	Q96H12	275 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	C5orf34	Q96MH7	638 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR6C1	Q96RD1	312 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ACTR6	Q9GZN1	396 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	RAB33B	Q9H082	229 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ATG5	Q9H1Y0	275 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MGAT4C	Q9UBM8	478 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	PPIE	Q9UNP9	301 aa	Known RBP	12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ANKRD20A5P	A0PJZ0	165 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	AFF3	P51826	1226 aa	Known RBP	12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	POU3F1	Q03052	451 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	C2orf76	Q3KRA6	126 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	OR10K2	Q6IF99	312 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	NLRC3	Q7RTR2	1065 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	NKD1	Q969G9	470 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	C12orf57	Q99622	126 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	DHDH	Q9UQ10	334 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LRP12	Q9Y561	859 aa		12.47	□□□□□ -0.41
CACNA1C-231	ENST00000616390		F8W036	122 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ACOT7	O00154	380 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	LMX1B	O60663	402 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	IGF2	P01344	180 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SULT1A3	P0DMM9	295 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SULT1A4	P0DMN0	295 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	SPOCK1	Q08629	439 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CAMK2D	Q13557	499 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ANGPT1	Q15389	498 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	INPP5J	Q15735	1006 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	ZNF627	Q7L945	461 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	CA10	Q9NS85	328 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	TAS2R4	Q9NYW5	299 aa		12.46	□□□□□ -0.41
CACNA1C-231	ENST00000616390	MEN1	O00255	615 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GLS	O94925	669 aa	Predicted RBP	12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	SIX6	O95475	246 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	STAR	P49675	285 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	RIDA	P52758	137 aa	Known RBP	12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	PER3	P56645	1201 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	DCXR	Q7Z4W1	244 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	BIVM	Q86UB2	503 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	FTMT	Q8N4E7	242 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	OR51A2	Q8NGJ7	313 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZNF519	Q8TB69	540 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	SLC41A2	Q96JW4	573 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	KLRF1	Q9NZS2	232 aa		12.46	□□□□□ -0.42
CACNA1C-231	ENST00000616390	MEIKIN	A0A087WXM9	373 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TRBV5-7	A0A0A0MS05	114 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	IGLV1-36	A0A0B4J1U3	117 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	IGKV1D-43	A0A0B4J1Z2	117 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	LOC101059948	A0A1B0GTJ6	334 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390		A0A1W2PQD3	144 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ARGFX	A6NJG6	315 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	NPIPA5	E9PKD4	350 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	SMAD9	O15198	467 aa	Known RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	MT-ATP6	P00846	226 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GTF2F2	P13984	249 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZNF823	P16415	610 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	CARD18	P57730	90 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GLO1	Q04760	184 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	POU4F3	Q15319	338 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TMEM205	Q6UW68	189 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	COX15	Q7KZN9	410 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	JAGN1	Q8N5M9	183 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	FAM3D	Q96BQ1	224 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ELF5	Q9UKW6	265 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	NPIPA1	Q9UND3	350 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	MRPS17	Q9Y2R5	130 aa	Known RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	CPAMD8	Q8IZJ3	1885 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TRBV11-1	A0A0K0K1C0	115 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	PYCARD-AS1	I3L0S3	204 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	CTAG2	O75638	210 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	DXO	O77932	396 aa	Known RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	HRG	P04196	525 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	S100A9	P06702	114 aa	Known RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TSPAN5	P62079	268 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GLYATL3	Q5SZD4	288 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ASPHD2	Q6ICH7	369 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	KCTD18	Q6PI47	426 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TEX261	Q6UWH6	196 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZNF767P	Q75MW2	155 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	FGD2	Q7Z6J4	655 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	SLC25A44	Q96H78	314 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	CCDC120	Q96HB5	630 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GINS4	Q9BRT9	223 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	HRH3	Q9Y5N1	445 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390		U3KQ87	197 aa		12.45	□□□□□ -0.42
CACNA1C-231	ENST00000616390	PHYH	O14832	338 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	T	O15178	435 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GDF9	O60383	454 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZNF432	O94892	652 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	GIMD1	P0DJR0	217 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	PSMA6	P60900	246 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	TLE3	Q04726	772 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	PUDP	Q08623	228 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	RAB11B	Q15907	218 aa		12.44	□□□□□ -0.42
CACNA1C-231	ENST00000616390	ZBTB37	Q5TC79	503 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms