RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 HIST2H3AQ71DI3 136 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 LINC00346Q8IVM7 164 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 FGFBP3Q8TAT2 258 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 THEM6Q8WUY1 208 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 GGHQ92820 318 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 MYCBPQ99417 103 aaPredicted RBP12.83□□□□□ -0.35
CD48-203ENST00000613788 MED18Q9BUE0 208 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 GDF2Q9UK05 429 aaPredicted RBP12.83□□□□□ -0.35
CD48-203ENST00000613788 FBXL3Q9UKT7 428 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 PCDHGB5Q9Y5G0 923 aa12.83□□□□□ -0.35
CD48-203ENST00000613788 A0A1W2PR80 420 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 TUBAL3A6NHL2 446 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 PTGES3LE9PB15 166 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 SGCEO43556 437 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 APOL3O95236 402 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 PTHP01270 115 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 LYNP07948 512 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 ALOX5APP20292 161 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 CRHBPP24387 322 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 DCKP27707 260 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
CD48-203ENST00000613788 HCCSP53701 268 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 TUBA1BP68363 451 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 TUBA4AP68366 448 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 PSG4Q00888 419 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 TUBA1AQ71U36 451 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 MDP1Q86V88 176 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 ACBD7Q8N6N7 88 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 FAM169BQ8N8A8 192 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 OR10H4Q8NGA5 316 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 OR52I1Q8NGK6 324 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 IPCEF1Q8WWN9 437 aaPredicted RBP12.83□□□□□ -0.36
CD48-203ENST00000613788 ASB17Q8WXJ9 295 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 TMEM80Q96HE8 168 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 OR2H1Q9GZK4 316 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
CD48-203ENST00000613788 NGBQ9NPG2 151 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 NPDC1Q9NQX5 325 aaPredicted RBP12.83□□□□□ -0.36
CD48-203ENST00000613788 PLEK2Q9NYT0 353 aa12.83□□□□□ -0.36
CD48-203ENST00000613788 IQCMA0A1B0GVH7 501 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 J3QRE1 110 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 RER1O15258 196 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 PABPC1L2AQ5JQF8 200 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
CD48-203ENST00000613788 RHOUQ7L0Q8 258 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
CD48-203ENST00000613788 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
CD48-203ENST00000613788 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 COPS4Q9BT78 406 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 INPP5EQ9NRR6 644 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 FKBP14Q9NWM8 211 aa12.82□□□□□ -0.36
CD48-203ENST00000613788 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
CD48-203ENST00000613788 UBR5O95071 2799 aaPredicted RBP12.81□□□□□ -0.36
CD48-203ENST00000613788 SERPINA5P05154 406 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 RNF224P0DH78 156 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 PSKH1P11801 424 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 ECH1Q13011 328 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 RAB35Q15286 201 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 C3orf36Q3SXR2 165 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 CCDC92Q53HC0 331 aaPredicted RBP12.81□□□□□ -0.36
CD48-203ENST00000613788 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 AKR7LQ8NHP1 331 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 ST7LQ8TDW4 575 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
CD48-203ENST00000613788 MAP6Q96JE9 813 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 TBX5Q99593 518 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 C1QTNF6Q9BXI9 259 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 HDHD2Q9H0R4 259 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 WNT5BQ9H1J7 359 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
CD48-203ENST00000613788 DIMT1Q9UNQ2 313 aaKnown RBP12.81□□□□□ -0.36
CD48-203ENST00000613788 MYRFQ9Y2G1 1151 aa12.81□□□□□ -0.36
CD48-203ENST00000613788 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
CD48-203ENST00000613788 CASKO14936 926 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 DOK2O60496 412 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 IGKV3-15P01624 115 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 IGHA1P01876 353 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 COX5BP10606 129 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 MYL12AP19105 171 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 EEF1B2P24534 225 aaKnown RBP12.8□□□□□ -0.36
CD48-203ENST00000613788 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 SLC35A2P78381 396 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 EGR3Q06889 387 aa12.8□□□□□ -0.36
CD48-203ENST00000613788 RAB39AQ14964 217 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms