RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 OR51V1Q9H2C8 321 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 RIBC2Q9H4K1 309 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 HINT3Q9NQE9 182 aaKnown RBP14.36□□□□□ -0.11
IRF1-211ENST00000613424 CA10Q9NS85 328 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 SPEF1Q9Y4P9 236 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 LHFPL6Q9Y693 200 aa14.36□□□□□ -0.11
IRF1-211ENST00000613424 TEX15Q9BXT5 2789 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 RER1O15258 196 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 SGCEO43556 437 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 SNAP29O95721 258 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 CD8AP01732 235 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 ANPEPP15144 967 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 CCNOP22674 350 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 FMO3P31513 532 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 THBS4P35443 961 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 GGT2P36268 569 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 HIST1H3AP68431 136 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 NKX6-1P78426 367 aaPredicted RBP14.35□□□□□ -0.11
IRF1-211ENST00000613424 GALK2Q01415 458 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 RCN1Q15293 331 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 HIST2H3PS2Q5TEC6 136 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 LINC01590Q5TEZ4 76 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 C12orf73Q69YU5 71 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 HIST2H3AQ71DI3 136 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 VASH1Q7L8A9 365 aaPredicted RBP14.35□□□□□ -0.11
IRF1-211ENST00000613424 LINC00346Q8IVM7 164 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 FBXL14Q8N1E6 418 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 MUC15Q8N387 334 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 ZNF511Q8NB15 262 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 GJC3Q8NFK1 279 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 OR6K6Q8NGW6 343 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 MBD6Q96DN6 1003 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 WDR76Q9H967 626 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 CDH20Q9HBT6 801 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 FAIMQ9NVQ4 179 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 CYB5R1Q9UHQ9 305 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 ORC6Q9Y5N6 252 aa14.35□□□□□ -0.11
IRF1-211ENST00000613424 NAV2Q8IVL1 2488 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 C5orf49A4QMS7 147 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 PRKYO43930 277 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 DOK2O60496 412 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 GLCEO94923 617 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 COX5BP10606 129 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 GDI2P50395 445 aaKnown RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 BLVRAP53004 296 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 ADAM8P78325 824 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 ELF3P78545 371 aaPredicted RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 EFNB1P98172 346 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 SNTB2Q13425 540 aaKnown RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 DEFB113Q30KQ7 82 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 ZIK1Q3SY52 487 aaPredicted RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 AGAP6Q5VW22 663 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 SLC18B1Q6NT16 456 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 CXXC5Q7LFL8 322 aaKnown RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 DTX2Q86UW9 622 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 BBS1Q8NFJ9 593 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 OR2AJ1Q8NGZ0 328 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 TMEM171Q8WVE6 324 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 EME1Q96AY2 570 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 TRAF4Q9BUZ4 470 aaPredicted RBP14.34□□□□□ -0.11
IRF1-211ENST00000613424 PRRG3Q9BZD7 231 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 ZNF442Q9H7R0 627 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 PLEK2Q9NYT0 353 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 KCNG2Q9UJ96 466 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 ITGB1BP2Q9UKP3 347 aa14.34□□□□□ -0.11
IRF1-211ENST00000613424 M0R129 80 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 ZNF593O00488 134 aaPredicted RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 SYNGR3O43761 229 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 TLX2O43763 284 aaPredicted RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 GPRIN2O60269 458 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 OR4A8P0C604 315 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 FAM157BP0CG42 384 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 PCSK6P29122 969 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 GLRXP35754 106 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 SERPINF1P36955 418 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 RPS27P42677 84 aaKnown RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 HTR5AP47898 357 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 RAD23AP54725 363 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 UCP2P55851 309 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 ADIPOQQ15848 244 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 MST1LQ2TV78 715 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 KLHL12Q53G59 568 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 TCEANCQ8N8B7 351 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 OR1F12Q8NHA8 337 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 CBLN4Q9NTU7 201 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 BEX4Q9NWD9 120 aaPredicted RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 GDF2Q9UK05 429 aaPredicted RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 NDRG4Q9ULP0 352 aaKnown RBP14.33□□□□□ -0.12
IRF1-211ENST00000613424 COMMD3-BMI1R4GMX3 469 aa14.33□□□□□ -0.12
IRF1-211ENST00000613424 VPS13CQ709C8 3753 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 OR6C6A6NF89 314 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 VSTM5A8MXK1 200 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 OVOL3O00110 214 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 PRODHO43272 600 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 TMCC2O75069 709 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 PSKH1P11801 424 aa14.32□□□□□ -0.12
IRF1-211ENST00000613424 SLC2A5P22732 501 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms