RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CHST9Q7L1S5 443 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HOXB13Q92826 284 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR5AC2Q9NZP5 309 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 NLRC5Q86WI3 1866 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 IGSF6O95976 241 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 GALR1P47211 349 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 GPR12P47775 334 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 LRRC73Q5JTD7 316 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SIRPB2Q5JXA9 342 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 GLB1LQ6UWU2 654 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TAAR1Q96RJ0 339 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 C1QTNF6Q9BXI9 259 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CNTD2Q9H8S5 307 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZFP30Q9Y2G7 519 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 DOPEY2Q9Y3R5 2298 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PYCARD-AS1I3L0S3 204 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRKRAO75569 313 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TRHRP34981 398 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TGFBR1P36897 503 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 NRLP54845 237 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HSD11B2P80365 405 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF660Q6AZW8 331 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ADGRA1Q86SQ6 560 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR2AJ1Q8NGZ0 328 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 FBXW2Q9UKT8 454 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 KCNMB2Q9Y691 235 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MED12Q93074 2177 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TRBV4-1A0A0J9YWV2 114 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 RECKO95980 971 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 IFI6P09912 130 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MTCP1P56278 107 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 Q5BKY6 102 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MARCH8Q5T0T0 291 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 LCN10Q6JVE6 187 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 DHRS13Q6UX07 377 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TMPPEQ6ZT21 453 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 NHLRC2Q8NBF2 726 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 COL25A1Q9BXS0 654 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 B3GAT3O94766 335 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ARG1P05089 322 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ADRA2CP18825 462 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 FABP5Q01469 135 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CAPNS2Q96L46 248 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 BPIFA1Q9NP55 256 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TEAD1P28347 426 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRDX3P30048 256 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SRP14P37108 136 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SLC19A1P41440 591 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ISXQ2M1V0 245 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HYAL4Q2M3T9 481 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SNAI3Q3KNW1 292 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 BRICD5Q6PL45 260 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SAMD8Q96LT4 415 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MCHR1Q99705 422 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM208Q9BTX3 173 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CDCP1Q9H5V8 836 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 A0A1B0GVT2 93 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 SOWAHBA6NEL2 793 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 GLCEO94923 617 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 BTF3P20290 206 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TIA1P31483 386 aaKnown RBP eCLIP4.55□□□□□ -1.689e-7■■■□□ 17.7
VPS13D-213ENST00000613099 ERVS71-1P61550 626 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 LIMS2Q7Z4I7 341 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM183AQ8IXX5 376 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MUC20Q8N307 709 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TOMM40LQ969M1 308 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ARHGAP9Q9BRR9 750 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MAGEH1Q9H213 219 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 UBTD1Q9HAC8 227 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRR36Q9H6K5 1346 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MAN2B1O00754 1011 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 DLEU1O43261 78 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 EPHX1P07099 455 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CMTM4Q8IZR5 234 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TLNRD1Q9H1K6 362 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PXMP2Q9NR77 195 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CSTBP04080 98 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CXCL2P19875 107 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CCKBRP32239 447 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR7A5Q15622 319 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF761Q86XN6 746 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ANAPC16Q96DE5 110 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZFP64Q9NPA5 681 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TRAPPC2LQ9UL33 140 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 TEX50A0A1B0GTY4 177 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ST8SIA3O43173 380 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 CD1BP29016 333 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HTR5AP47898 357 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MRPS34P82930 218 aaKnown RBP4.55□□□□□ -1.68
VPS13D-213ENST00000613099 MSMO1Q15800 293 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 VHLLQ6RSH7 139 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 OR4K1Q8NGD4 311 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PRRC1Q96M27 445 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF681Q96N22 645 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 HIST1H2AAQ96QV6 131 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 FAAP24Q9BTP7 215 aa4.55□□□□□ -1.68
VPS13D-213ENST00000613099 PLXNA3P51805 1871 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms