RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	KCTD18	Q6PI47	426 aa	Predicted RBP	12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	NKAIN3	Q8N8D7	197 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	OR4A4P	Q8NGN8	299 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	ASB12	Q8WXK4	309 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	MRGPRF	Q96AM1	343 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	SLC25A44	Q96H78	314 aa	Predicted RBP	12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	CCDC3	Q9BQI4	270 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	NMES1	Q9C002	83 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	FANCF	Q9NPI8	374 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	UQCC1	Q9NVA1	299 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	MYEF2	Q9P2K5	600 aa	Known RBP	12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	GTF2A1L	Q9UNN4	478 aa		12.36	□□□□□ -0.43
UBE2F-223	ENST00000612130	FAM221B	A6H8Z2	402 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	DBX1	A6NMT0	343 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TGFBR3L	H3BV60	316 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	XKRY	O14609	159 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	SLC31A1	O15431	190 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	STK17B	O94768	372 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	PNP	P00491	289 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBP	P20226	339 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	NPBWR1	P48145	328 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CX3CR1	P49238	355 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	RIDA	P52758	137 aa	Known RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CYCS	P99999	105 aa	Known RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	NKPD1	Q17RQ9	610 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	MOGAT2	Q3SYC2	334 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CORO6	Q6QEF8	472 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	SLC35D2	Q76EJ3	337 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	C16orf52	Q8NHV5	167 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CCL4L1	Q8NHW4	92 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	DCUN1D4	Q92564	292 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	KTI12	Q96EK9	354 aa	Predicted RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CMKLR1	Q99788	373 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	KXD1	Q9BQD3	176 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TREM1	Q9NP99	234 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	OBP2A	Q9NY56	170 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CSAG2	Q9Y5P2	127 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBC1D3D	A0A087WVF3	549 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CPED1	A4D0V7	1026 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	BLACE	A4D250	179 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	METTL21EP	A6NDL7	271 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBC1D3L	B9A6J9	549 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CRYBA1	P05813	215 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CSN2	P05814	226 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBC1D3H	P0C7X1	549 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	FOLR2	P14207	255 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	ITGB8	P26012	769 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	PAX6	P26367	422 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	AVPR2	P30518	371 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CCR4	P51679	360 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TAS2R31	P59538	309 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	MFGE8	Q08431	387 aa	Predicted RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CD226	Q15762	336 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	ZNF260	Q3ZCT1	412 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	AWAT2	Q6E213	333 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBC1D3C	Q6IPX1	549 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TRAPPC6B	Q86SZ2	158 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	CD163	Q86VB7	1156 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	FJX1	Q86VR8	437 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	OR4S1	Q8NGB4	309 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	OR9A4	Q8NGU2	314 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	WDR92	Q96MX6	357 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	DGAT2	Q96PD7	388 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	NKX3-1	Q99801	234 aa	Predicted RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	GAL3ST1	Q99999	423 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	MRPS33	Q9Y291	106 aa	Known RBP	12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	TMED7	Q9Y3B3	224 aa		12.35	□□□□□ -0.43
UBE2F-223	ENST00000612130	OIP5	O43482	229 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	TIMP1	P01033	207 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	HLA-DQA2	P01906	255 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	RNH1	P13489	461 aa	Known RBP	12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	DNASE1L1	P49184	302 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	SRSF3	P84103	164 aa	Known RBP	12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	FUT7	Q11130	342 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	PDZK1IP1	Q13113	114 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	RUNX3	Q13761	415 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	RD3	Q7Z3Z2	195 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	GATS	Q8NAP1	163 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	RXFP4	Q8TDU9	374 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	C8orf44	Q96CB5	159 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	CMSS1	Q9BQ75	279 aa	Known RBP	12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	OR10A5	Q9H207	317 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	RNF122	Q9H9V4	155 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	ZMAT3	Q9HA38	289 aa	Known RBP	12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	CYTL1	Q9NRR1	136 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	UBQLN4	Q9NRR5	601 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	HHLA2	Q9UM44	414 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	B9D1	Q9UPM9	204 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	MEX3A	A1L020	520 aa	Known RBP	12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	POM121B	A6NF01	834 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	EFS	O43281	561 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	SCGN	O76038	276 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	APOD	P05090	189 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	SPARC	P09486	303 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	FAM157C	P0CG43	387 aa		12.34	□□□□□ -0.43
UBE2F-223	ENST00000612130	SMIM6	P0DI80	62 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms