RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SIGLEC5O15389 551 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 PIN1P1O15428 100 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 SEC14L5O43304 696 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 TRAPPC6AO75865 159 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 HLA-DQB1P01920 261 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 GABRG2P18507 467 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 GABRR1P24046 479 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 KIR2DL1P43626 348 aaPredicted RBP6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 RAG2P55895 527 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 FOXL2P58012 376 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 SIGLEC14Q08ET2 396 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 TMEM81Q6P7N7 255 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 NPSR1Q6W5P4 371 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 FJX1Q86VR8 437 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 OR11G2Q8NGC1 345 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 OR4D10Q8NGI6 311 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 ARL11Q969Q4 196 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 C4orf45Q96LM5 186 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 NECAB3Q96P71 396 aaPredicted RBP6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 CRB3Q9BUF7 120 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 CHST6Q9GZX3 395 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 PARP12Q9H0J9 701 aaKnown RBP6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 TMEM231Q9H6L2 316 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 MTFP1Q9UDX5 166 aa6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 PCDHGA9Q9Y5G4 932 aaKnown RBP6.21□□□□□ -1.42
SYNPO2-206ENST00000610556 TRBV11-1A0A0K0K1C0 115 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 D6RAR5 112 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZNF749O43361 778 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CTAG2O75638 210 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 GNB3P16520 340 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZNF93P35789 620 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 RPS27AP62979 156 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 UBA52P62987 128 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 RAB30Q15771 203 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 TMEM176BQ3YBM2 270 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 FAM71CQ8NEG0 241 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 OTOSQ8NHW6 89 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZNRF4Q8WWF5 429 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 MAFIPQ8WZ33 124 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 RAB3CQ96E17 227 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 TSPAN32Q96QS1 320 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SLC19A3Q9BZV2 496 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 C1orf198Q9H425 327 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 EHFQ9NZC4 300 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 PILRAQ9UKJ1 303 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ARHGEF17Q96PE2 2063 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 A0A087WV48 116 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 IGHV5-51A0A0C4DH38 117 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 TLCD2A6NGC4 264 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 NPIPA2E9PIF3 369 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 NPIPA3F8WFD2 350 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SDCBPO00560 298 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SLC17A2O00624 439 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 KLF4O43474 513 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CT45A8P0DMV1 189 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CT45A9P0DMV2 189 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CTLA4P16410 223 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ALOX5APP20292 161 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 THBS2P35442 1172 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CBX5P45973 191 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 BAMBIQ13145 260 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 IL10RAQ13651 578 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 MFSD13AQ14CX5 517 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZNF658BQ4V348 819 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 CT45A2Q5DJT8 189 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 FAM122CQ6P4D5 195 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 PRSS42Q7Z5A4 293 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 LRRC18Q8N456 261 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 TEX19Q8NA77 164 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 OR51A2Q8NGJ7 313 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 OR1J4Q8NGS1 313 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 OR51E1Q8TCB6 317 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 STK35Q8TDR2 534 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 PPP1R1CQ8WVI7 109 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 HOXB13Q92826 284 aaPredicted RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZC3H10Q96K80 434 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 GPR137Q96N19 417 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 LRFN5Q96NI6 719 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 OR8B4Q96RC9 309 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 NUDT9Q9BW91 350 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 EIF5A2Q9GZV4 153 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ZNF160Q9HCG1 818 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 MRPS28Q9Y2Q9 187 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 MRPS17Q9Y2R5 130 aaKnown RBP6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 B3GALT1Q9Y5Z6 326 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 HS3ST3A1Q9Y663 406 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SPTY2D1-AS1A0A0U1RR47 76 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 A0A1W2PNR3 127 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 C17orf51A8MQB3 221 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SULT2B1O00204 365 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 ADAM11O75078 769 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 MPC2O95563 127 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 SERPINA5P05154 406 aa6.2□□□□□ -1.42
SYNPO2-206ENST00000610556 RRASP10301 218 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms