RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TGM3Q08188 693 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 TCP10Q12799 353 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 LY6EQ16553 131 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 HSP90AB3PQ58FF7 597 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 XKR4Q5GH76 650 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 RAET1LQ5VY80 246 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 METTL21CQ5VZV1 264 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 NANOGP8Q6NSW7 305 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 PRMT9Q6P2P2 845 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 UBALD2Q8IYN6 164 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 CMTM1Q8IZ96 169 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 NPWQ8N729 165 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR2A1Q8NGT9 310 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 C15orf40Q8WUR7 153 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 TM4SF18Q96CE8 201 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 RBMXL1Q96E39 390 aaKnown RBP2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 PANX1Q96RD7 426 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 SIRT7Q9NRC8 400 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 GPATCH2LQ9NWQ4 482 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 UXTQ9UBK9 157 aaPredicted RBP2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 TMED5Q9Y3A6 229 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 COL22A1Q8NFW1 1626 aaPredicted RBP2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 SVILO95425 2214 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 SHANK1Q9Y566 2161 aa2.15□□□□□ -2.07
RNU6-88P-201ENST00000606801 SCN4AP35499 1836 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 TRIM64CA6NLI5 447 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 CCDC169A6NNP5 214 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 SMKR1H3BMG3 65 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 ERLIN1O75477 346 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR2F2O95006 317 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 FTH1P02794 183 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 SERPINE2P07093 398 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 ATF6P18850 670 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 CEACAM3P40198 252 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 TNNT2P45379 298 aaPredicted RBP2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 CSNK1EP49674 416 aaKnown RBP2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 CRISP1P54107 249 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 ARG2P78540 354 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 CDH17Q12864 832 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 C9orf135Q5VTT2 229 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 C22orf42Q6IC83 251 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 C11orf72Q8NBR9 251 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR8U1Q8NH10 309 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC38A4Q969I6 547 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 GALNT14Q96FL9 552 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 SPNS1Q9H2V7 528 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 HMG20AQ9NP66 347 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZDHHC4Q9NPG8 344 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 HRASLS2Q9NWW9 162 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 WIF1Q9Y5W5 379 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 KCNE3Q9Y6H6 103 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 PTPRTO14522 1441 aa2.14□□□□□ -2.07
RNU6-88P-201ENST00000606801 AHDC1Q5TGY3 1603 aaPredicted RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 NSD2O96028 1365 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 TRBV9A0A0B4J1U6 114 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 TMEM223A0PJW6 202 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 C9JVG2 144 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 K7EMT4 169 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SGK1O00141 431 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SIRPB1O00241 398 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 DNALI1O14645 258 aaPredicted RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 BET1O15155 118 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SOCS1O15524 211 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 RBFOX2O43251 390 aaKnown RBP eCLIP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 YIF1AO95070 293 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC25A14O95258 325 aaPredicted RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 EIF4EP06730 217 aaKnown RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 UBTFL6P0CB48 400 aaPredicted RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC1A1P43005 524 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 RAB10P61026 200 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 PRR3P79522 188 aaKnown RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 THEM4Q5T1C6 240 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 GPR107Q5VW38 600 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 FBXW9Q5XUX1 488 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SAXO2Q658L1 398 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 TMEM220Q6QAJ8 160 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 NPSR1Q6W5P4 371 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC16A14Q7RTX9 510 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 TMEM150AQ86TG1 271 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF615Q8N8J6 731 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR4A4PQ8NGN8 299 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 NUBPLQ8TB37 319 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SYNPRQ8TBG9 265 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 PIFOQ8TCI5 191 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 CAPSLQ8WWF8 208 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 TGS1Q96RS0 853 aaKnown RBP2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 GGA2Q9UJY4 613 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC17A4Q9Y2C5 497 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 PLA2R1Q13018 1463 aa2.13□□□□□ -2.07
RNU6-88P-201ENST00000606801 INSRP06213 1382 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 IGKV1-8A0A0C4DH67 115 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 SMCO3A2RU48 225 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 NCBP2LA6PVI3 153 aaKnown RBP2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 L7N2F9 121 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 NDUFAB1O14561 156 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 RAD51BO15315 384 aa2.12□□□□□ -2.07
RNU6-88P-201ENST00000606801 FKBP6O75344 327 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms