RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 C6orf141Q5SZD1 244 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ZNF774Q6NX45 483 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 TMEM53Q6P2H8 277 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 MEX3BQ6ZN04 569 aaKnown RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 SPATC1Q76KD6 591 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 SLC16A9Q7RTY1 509 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 DCXRQ7Z4W1 244 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 P2RY8Q86VZ1 359 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 CDC20BQ86Y33 519 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ZNF584Q8IVC4 421 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 SLC35F2Q8IXU6 374 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ZNF786Q8N393 782 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 BPIFB6Q8NFQ5 453 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 OR10S1Q8NGN2 331 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 OR2AJ1Q8NGZ0 328 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ST7LQ8TDW4 575 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 NANOS1Q8WY41 292 aaKnown RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 HSD17B8Q92506 261 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 MUCL1Q96DR8 90 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 LGALS12Q96DT0 336 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 MAP6Q96JE9 813 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 ZNF75AQ96N20 296 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 CDADC1Q9BWV3 514 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 OR2H1Q9GZK4 316 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 OR10A4Q9H209 315 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 KCNN2Q9H2S1 579 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 RNF121Q9H920 327 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 PAK1IP1Q9NWT1 392 aaPredicted RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 HAO2Q9NYQ3 351 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 CRIM1Q9NZV1 1036 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 NDRG3Q9UGV2 375 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 GDF2Q9UK05 429 aaPredicted RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 COPS3Q9UNS2 423 aa6.69□□□□□ -1.34
MSH6-211ENST00000606499 KLF2Q9Y5W3 355 aaPredicted RBP6.69□□□□□ -1.34
MSH6-211ENST00000606499 APCP25054 2843 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SNTNA6NMZ2 147 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 PRR32B1ATL7 298 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 J3QRE1 110 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 M0R1B8 84 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SGCEO43556 437 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 DOK2O60496 412 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 RAB36O95755 333 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 LYNP07948 512 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 ADRA2AP08913 450 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 CCL2P13500 99 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 HOXB1P14653 301 aaPredicted RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 ZNF14P17017 642 aaPredicted RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 APEX1P27695 318 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 ATP6V1E1P36543 226 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 ARR3P36575 388 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 KIR2DL3P43628 341 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SLC15A1P46059 708 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 PCBD1P61457 104 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 HIST1H3AP68431 136 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 MVKQ03426 396 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SPOCK1Q08629 439 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SCRN3Q0VDG4 424 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 POU4F2Q12837 409 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 TMED1Q13445 227 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 MED21Q13503 144 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 RAB39AQ14964 217 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 RAB35Q15286 201 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 CCDC92Q53HC0 331 aaPredicted RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 HIST2H3PS2Q5TEC6 136 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 AHSA2Q719I0 299 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 HIST2H3AQ71DI3 136 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 SSX6Q7RTT6 188 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SYT9Q86SS6 491 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 CCDC36Q8IYA8 594 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 CPEB3Q8NE35 698 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 GJC3Q8NFK1 279 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 OR10H4Q8NGA5 316 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 OR52I1Q8NGK6 324 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 OTOSQ8NHW6 89 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 THEM6Q8WUY1 208 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SLC7A6Q92536 515 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SGCDQ92629 289 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 SLAMF6Q96DU3 332 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 USB1Q9BQ65 265 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 ABHD6Q9BV23 337 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 YIPF3Q9GZM5 350 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 OBP2BQ9NPH6 170 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 PNRC2Q9NPJ4 139 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 PLEK2Q9NYT0 353 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 PSORS1C1Q9UIG5 152 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 LAMP5Q9UJQ1 280 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 EXOGQ9Y2C4 368 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 MYRFQ9Y2G1 1151 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 RPL36Q9Y3U8 105 aaKnown RBP6.68□□□□□ -1.34
MSH6-211ENST00000606499 LRRC42Q9Y546 428 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 TIMM10BQ9Y5J6 103 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 HECTD1Q9ULT8 2610 aa6.68□□□□□ -1.34
MSH6-211ENST00000606499 ASH1LQ9NR48 2969 aaKnown RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 PTPN13Q12923 2485 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 LOC100509620A0A075B734 347 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 A0A1W2PQL4 384 aaPredicted RBP6.67□□□□□ -1.34
MSH6-211ENST00000606499 OR6C6A6NF89 314 aa6.67□□□□□ -1.34
MSH6-211ENST00000606499 ZNF878C9JN71 531 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms