RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	STX18	Q9P2W9	335 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-219	ENST00000602265	PPP1R3C	Q9UQK1	317 aa		11.2	□□□□□ -0.62
TIMM50-219	ENST00000602265	TIMM10B	Q9Y5J6	103 aa		11.2	□□□□□ -0.62
TIMM50-219	ENST00000602265	RYR3	Q15413	4870 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	KIR2DS1	A0A191URI9	304 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	KNG1	P01042	644 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	THRB	P10828	461 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	RAG2	P55895	527 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	STX1B	P61266	288 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	LAPTM4A	Q15012	233 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	OLFML2A	Q68BL7	652 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	ASPHD2	Q6ICH7	369 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZER1	Q7Z7L7	766 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	SYT9	Q86SS6	491 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	ALDH16A1	Q8IZ83	802 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	MUC20	Q8N307	709 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	OR10S1	Q8NGN2	331 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	RAB40A	Q8WXH6	277 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	OR2V2	Q96R30	315 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	PKP2	Q99959	881 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	EBF4	Q9BQW3	602 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	BEX1	Q9HBH7	125 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	MAN2C1	Q9NTJ4	1040 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	HIF3A	Q9Y2N7	669 aa		11.19	□□□□□ -0.62
TIMM50-219	ENST00000602265	CLPSL1	A2RUU4	121 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	FSTL3	O95633	263 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	COX5B	P10606	129 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	TUBG1	P23258	451 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	TNFSF4	P23510	183 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	RBM34	P42696	430 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	IDH3A	P50213	366 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	GZMM	P51124	257 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	ARHGDIA	P52565	204 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	CD47	Q08722	323 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	TAF11	Q15544	211 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	FAM205BP	Q63HN1	556 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	BRD3OS	Q6XYD6	125 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265		Q6YL49	198 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	C17orf107	Q6ZR85	190 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	PATL1	Q86TB9	770 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	KLB	Q86Z14	1044 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	FITM2	Q8N6M3	262 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	LRRC75A	Q8NAA5	344 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	NPEPL1	Q8NDH3	523 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	OR4F5	Q8NH21	305 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	TMEM255B	Q8WV15	326 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	HAVCR1	Q96D42	359 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	SGTB	Q96EQ0	304 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	THOC1	Q96FV9	657 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	RBM4B	Q9BQ04	359 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	ALG12	Q9BV10	488 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	CHIA	Q9BZP6	476 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	TUBG2	Q9NRH3	451 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZNF281	Q9Y2X9	895 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	STARD10	Q9Y365	291 aa		11.18	□□□□□ -0.62
TIMM50-219	ENST00000602265	GMNC	A6NCL1	334 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	POLR3G	O15318	223 aa	Predicted RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	TGDS	O95455	350 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	MTPN	P58546	118 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	PCBD1	P61457	104 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	FHL1	Q13642	323 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	FIP1L1	Q6UN15	594 aa	Known RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	BTNL3	Q6UXE8	466 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	CCDC80	Q76M96	950 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	DPP10	Q8N608	796 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	TMEM86B	Q8N661	226 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	TMEM239	Q8WW34	195 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	CMBL	Q96DG6	245 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	TMEM246	Q9BRR3	403 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	CCDC28B	Q9BUN5	200 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	KAT8	Q9H7Z6	458 aa	Known RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	MARCH7	Q9H992	704 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	NOX4	Q9NPH5	578 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	NDRG4	Q9ULP0	352 aa	Known RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265		V9GYY5	206 aa	Predicted RBP	11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265	PLXNB1	O43157	2135 aa		11.17	□□□□□ -0.62
TIMM50-219	ENST00000602265		M0QZ24	198 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	SURF4	O15260	269 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZNF205	O95201	554 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ABHD16A	O95870	558 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	CYB5R3	P00387	301 aa	Predicted RBP	11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	MELTF	P08582	738 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	NR2C1	P13056	603 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	RPS2	P15880	293 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	SELE	P16581	610 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	GSTM3	P21266	225 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	MSR1	P21757	451 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	RPL27	P61353	136 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	CYP51A1	Q16850	503 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZNF404	Q494X3	552 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	AGK	Q53H12	422 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ALG10	Q5BKT4	473 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	BRICD5	Q6PL45	260 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ARL9	Q6T311	187 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	ZNF841	Q6ZN19	808 aa		11.16	□□□□□ -0.62
TIMM50-219	ENST00000602265	DHDDS	Q86SQ9	333 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms