RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
ZNF548-210ENST00000600442 POLE4Q9NR33 117 aa11.28□□□□□ -0.6
ZNF548-210ENST00000600442 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
ZNF548-210ENST00000600442 CYB5R1Q9UHQ9 305 aa11.28□□□□□ -0.6
ZNF548-210ENST00000600442 FOXD3Q9UJU5 478 aaPredicted RBP11.28□□□□□ -0.6
ZNF548-210ENST00000600442 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
ZNF548-210ENST00000600442 A0A1B0GTH9 108 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 PNMA8CA0A1B0GUJ8 204 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 TMEM212A6NML5 194 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 ARL6IP5O75915 188 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 KLK2P20151 261 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 HSD11B1P28845 292 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 DCTDP32321 178 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 PER3P56645 1201 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 VBP1P61758 197 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 GRB2P62993 217 aaKnown RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 TGFBR3Q03167 851 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 KLRB1Q12918 225 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 AQP6Q13520 282 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SSX1Q16384 188 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 YIF1BQ5BJH7 314 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 FAM27BQ5VT28 67 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SYT9Q86SS6 491 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 TUSC5Q8IXB3 177 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SMAP2Q8WU79 429 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 TMEM203Q969S6 136 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF775Q96BV0 537 aaPredicted RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 TAAR6Q96RI8 345 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 DCUN1D5Q9BTE7 237 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 NAA50Q9GZZ1 169 aaKnown RBP11.27□□□□□ -0.61
ZNF548-210ENST00000600442 OR51E2Q9H255 320 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SP140LQ9H930 580 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 CENPMQ9NSP4 180 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 ACOXLQ9NUZ1 547 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 GALNT8Q9NY28 637 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 COPS3Q9UNS2 423 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 MED13Q9UHV7 2174 aa11.27□□□□□ -0.61
ZNF548-210ENST00000600442 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 CD8B2A6NJW9 211 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF879B4DU55 563 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF878C9JN71 531 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 K7EM74 188 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 PRRG2O14669 202 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 RPP14O95059 124 aaKnown RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 MPZL1O95297 269 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 PDGFAP04085 211 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 CRHP06850 196 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 CST2P09228 141 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ABOP16442 354 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 MYL9P24844 172 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 CCR9P51686 369 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 SCRN3Q0VDG4 424 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ALKBH1Q13686 389 aaKnown RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 CDK5R1Q15078 307 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 C3AR1Q16581 482 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 DMKNQ6E0U4 476 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 LYPD4Q6UWN0 246 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF704Q6ZNC4 412 aaPredicted RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 SSX6Q7RTT6 188 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF676Q8N7Q3 588 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 OR5AK2Q8NH90 309 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 AP3S1Q92572 193 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 GHSRQ92847 366 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 SPTSSAQ969W0 71 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 SLAMF6Q96DU3 332 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 SLITRK2Q9H156 845 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 DCSTAMPQ9H295 470 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 GPR35Q9HC97 309 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ASH2LQ9UBL3 628 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 MRM2Q9UI43 246 aaKnown RBP11.26□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF281Q9Y2X9 895 aa11.26□□□□□ -0.61
ZNF548-210ENST00000600442 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 TRIM64BA6NI03 449 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 ACOD1A6NK06 481 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 LOC110117498-PIK3R3F6TDL0 507 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 RPL36A-HNRNPH2H7BZ11 118 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
ZNF548-210ENST00000600442 ATE1O95260 518 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 CNOT4O95628 575 aaKnown RBP11.25□□□□□ -0.61
ZNF548-210ENST00000600442 GPANK1O95872 356 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 IL1AP01583 271 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 NR4A1P22736 598 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 CDAP32320 146 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 CRYBB2P43320 205 aa11.25□□□□□ -0.61
ZNF548-210ENST00000600442 RANBP1P43487 201 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms