RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SYNGR3O43761 229 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 TLX2O43763 284 aaPredicted RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 GLCEO94923 617 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 ATE1O95260 518 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 CRYAAP02489 173 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 SOD3P08294 240 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 PRR23D2P0DMB1 279 aaPredicted RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 COX5BP10606 129 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 NR4A1P22736 598 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 PEX2P28328 305 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 FMO3P31513 532 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 RPS27P42677 84 aaKnown RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 CENPAP49450 140 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 PCBD1P61457 104 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 OGFRL1Q5TC84 451 aaPredicted RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 VASH1Q7L8A9 365 aaPredicted RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 CXXC5Q7LFL8 322 aaKnown RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 SLC30A7Q8NEW0 376 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 EME1Q96AY2 570 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 PITX2Q99697 317 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 KCNN2Q9H2S1 579 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 CCNB1IP1Q9NPC3 277 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 NDRG4Q9ULP0 352 aaKnown RBP11.87□□□□□ -0.51
VRK3-219ENST00000600137 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 USF3Q68DE3 2245 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 TMEM129A0AVI4 362 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 ICMTO60725 284 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 STOMP27105 288 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 WNT5AP41221 380 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 RAD23AP54725 363 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 CDH11P55287 796 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 TRIP10Q15642 601 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 LRRC36Q1X8D7 754 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 PAMR1Q6UXH9 720 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 CFAP77Q6ZQR2 320 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.86□□□□□ -0.51
VRK3-219ENST00000600137 DTX2Q86UW9 622 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 LINC00346Q8IVM7 164 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 OR4F15Q8NGB8 312 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 TMEM163Q8TC26 289 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 SMAP2Q8WU79 429 aaPredicted RBP11.86□□□□□ -0.51
VRK3-219ENST00000600137 TMEM171Q8WVE6 324 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 NRG4Q8WWG1 115 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 SLC7A6Q92536 515 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 ZMYND19Q96E35 227 aaPredicted RBP11.86□□□□□ -0.51
VRK3-219ENST00000600137 IL4I1Q96RQ9 567 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 TEAD3Q99594 435 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 DHRS9Q9BPW9 319 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 ATP23Q9Y6H3 246 aa11.86□□□□□ -0.51
VRK3-219ENST00000600137 IQCMA0A1B0GVH7 501 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 ZNF593O00488 134 aaPredicted RBP11.85□□□□□ -0.51
VRK3-219ENST00000600137 SLC16A6O15403 523 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 PRODHO43272 600 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 SGCEO43556 437 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 PTHP01270 115 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 GABRB1P18505 474 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
VRK3-219ENST00000600137 THBS4P35443 961 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 BLVRAP53004 296 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 PLP2Q04941 152 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 SCRN3Q0VDG4 424 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 APOFQ13790 326 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 C11orf71Q6IPW1 123 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 ALDH16A1Q8IZ83 802 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 GJC3Q8NFK1 279 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 ST7LQ8TDW4 575 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 FBXW5Q969U6 566 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 PLEKHA8Q96JA3 519 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 C1orf198Q9H425 327 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 RNPEPL1Q9HAU8 725 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 CA10Q9NS85 328 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 GDF2Q9UK05 429 aaPredicted RBP11.85□□□□□ -0.51
VRK3-219ENST00000600137 PLEKHA6Q9Y2H5 1048 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 ARID1AO14497 2285 aa11.85□□□□□ -0.51
VRK3-219ENST00000600137 OVOL3O00110 214 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 GPRIN2O60269 458 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 HLA-DQA2P01906 255 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 DBHP09172 617 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 PCSK6P29122 969 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 GSTT1P30711 240 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
VRK3-219ENST00000600137 TTKP33981 857 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 GLRXP35754 106 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ENTPD1P49961 510 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 ADAM8P78325 824 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 SLC34A1Q06495 639 aa11.84□□□□□ -0.51
VRK3-219ENST00000600137 RAB35Q15286 201 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms