RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ADGRL4	Q9HBW9	690 aa		19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	EXOG	Q9Y2C4	368 aa	Known RBP	19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	MYRF	Q9Y2G1	1151 aa		19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	AMDHD2	Q9Y303	409 aa		19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	SLC25A15	Q9Y619	301 aa		19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	NOTCH2	Q04721	2471 aa		19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	ANKHD1	Q8IWZ3	2542 aa	Known RBP	19.17	■□□□□ 0.66
LTBP4-227	ENST00000600026	SPARC	P09486	303 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	CRYGS	P22914	178 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	CHN2	P52757	468 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	PCBD1	P61457	104 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	UGT2A3	Q6UWM9	527 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	SEZ6L2	Q6UXD5	910 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	DPPA2	Q7Z7J5	298 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	SLC35F2	Q8IXU6	374 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	STX19	Q8N4C7	294 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	OR4F15	Q8NGB8	312 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	NANOS1	Q8WY41	292 aa	Known RBP	19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	MYDGF	Q969H8	173 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	MUCL1	Q96DR8	90 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	SH3GL3	Q99963	347 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	ZNF416	Q9BWM5	594 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	CCNB1IP1	Q9NPC3	277 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	TMEM14A	Q9Y6G1	99 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	PRR14L	Q5THK1	2151 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	PKDREJ	Q9NTG1	2253 aa		19.16	■□□□□ 0.66
LTBP4-227	ENST00000600026	MYO9A	B2RTY4	2548 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ARPC4-TTLL3	A0A0A6YYG9	625 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	PTGES3L	E9PB15	166 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	CASK	O14936	926 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	APOL3	O95236	402 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	CRHBP	P24387	322 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	CAPZA2	P47755	286 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	UBE2N	P61088	152 aa	Known RBP	19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ACTC1	P68032	377 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ACTA1	P68133	377 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	TUBA1B	P68363	451 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	TUBA4A	P68366	448 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ENDOG	Q14249	297 aa	Known RBP	19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	SLC36A2	Q495M3	483 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	AHSA2	Q719I0	299 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	TUBA1A	Q71U36	451 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	DPY19L4	Q7Z388	723 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	SKA3	Q8IX90	412 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ZNF454	Q8N9F8	522 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	COPS4	Q9BT78	406 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	FGF20	Q9NP95	211 aa	Predicted RBP	19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	OBP2B	Q9NPH6	170 aa		19.15	■□□□□ 0.66
LTBP4-227	ENST00000600026	ZNF670-ZNF695	F2Z2N8	137 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	RAB36	O95755	333 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	OR2T7	P0C7T2	308 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	EEF1B2	P24534	225 aa	Known RBP	19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	GABARAPL2	P60520	117 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	ST3GAL4	Q11206	333 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	AQP6	Q13520	282 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	PCK2	Q16822	640 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	OTP	Q5XKR4	325 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	TMEM53	Q6P2H8	277 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	SSX8	Q7RTT4	187 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	SYT9	Q86SS6	491 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	CDC20B	Q86Y33	519 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	OR10H4	Q8NGA5	316 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	OR52I1	Q8NGK6	324 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	OR2T27	Q8NH04	317 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	MARVELD3	Q96A59	401 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	TMEM80	Q96HE8	168 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	NR1H4	Q96RI1	486 aa	Predicted RBP	19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	RNF121	Q9H920	327 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	FKBP14	Q9NWM8	211 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	NPAP1	Q9NZP6	1156 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	LAMP5	Q9UJQ1	280 aa		19.14	■□□□□ 0.65
LTBP4-227	ENST00000600026	ZNF503-AS2	A6NEH8	195 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	PHYH	O14832	338 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	SIAH2	O43255	324 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	UBL3	O95164	117 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	TNFAIP8	O95379	198 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	WNT11	O96014	354 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	DCK	P27707	260 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	SCRN3	Q0VDG4	424 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	EIF2B1	Q14232	305 aa	Known RBP	19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	DAZAP2	Q15038	168 aa	Predicted RBP	19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	C1QTNF12	Q5T7M4	302 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	SLC18B1	Q6NT16	456 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	LINC00346	Q8IVM7	164 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	ZNF295-AS1	Q8N0V1	137 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	GJC3	Q8NFK1	279 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	OTOS	Q8NHW6	89 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	MYCBP	Q99417	103 aa	Predicted RBP	19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	RHNO1	Q9BSD3	238 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	DUSP21	Q9H596	190 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	INPP5E	Q9NRR6	644 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	CHCHD3	Q9NX63	227 aa	Known RBP	19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	ZNF224	Q9NZL3	707 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	ASH2L	Q9UBL3	628 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	CYB5R1	Q9UHQ9	305 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	TIMM10B	Q9Y5J6	103 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	LHFPL6	Q9Y693	200 aa		19.13	■□□□□ 0.65
LTBP4-227	ENST00000600026	DAPL1	A0PJW8	107 aa		19.12	■□□□□ 0.65
LTBP4-227	ENST00000600026		A6NNC1	897 aa		19.12	■□□□□ 0.65
LTBP4-227	ENST00000600026	DEFB108A	A8MXU0	73 aa		19.12	■□□□□ 0.65

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms