RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 LINC00346Q8IVM7 164 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SVOPLQ8N434 492 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 NUP37Q8NFH4 326 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 OR2AJ1Q8NGZ0 328 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 OR2T4Q8NH00 348 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ZNRF4Q8WWF5 429 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 CENPNQ96H22 339 aaPredicted RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 PLEKHA8Q96JA3 519 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 PKP2Q99959 881 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 VRK1Q99986 396 aaPredicted RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 SYT3Q9BQG1 590 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 RACGAP1Q9H0H5 632 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 C1orf198Q9H425 327 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 PLK3Q9H4B4 646 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 PLEK2Q9NYT0 353 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ASH2LQ9UBL3 628 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 EIF3KQ9UBQ5 218 aaKnown RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 CMAHPQ9Y471 501 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 PMF1-BGLAPU3KQ54 211 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 LOC100509620A0A075B734 347 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 ANKRD65E5RJM6 399 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 RER1O15258 196 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 TFP02787 698 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 GAAP10253 952 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 BMP4P12644 408 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 RPS27P42677 84 aaKnown RBP9.56□□□□□ -0.88
LIG1-211ENST00000596457 RAD52P43351 418 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 HTR5AP47898 357 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 ERVS71-1P61550 626 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 LSM6P62312 80 aaKnown RBP9.56□□□□□ -0.88
LIG1-211ENST00000596457 SNRPD2P62316 118 aaKnown RBP9.56□□□□□ -0.88
LIG1-211ENST00000596457 ADAM8P78325 824 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 CDK5Q00535 292 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 GLO1Q04760 184 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 RAB35Q15286 201 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 ALKBH6Q3KRA9 238 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 ZNF362Q5T0B9 420 aaPredicted RBP9.56□□□□□ -0.88
LIG1-211ENST00000596457 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 RGS7BPQ6MZT1 257 aaPredicted RBP9.56□□□□□ -0.88
LIG1-211ENST00000596457 ZFP1Q6P2D0 407 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 FAHD1Q6P587 224 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 LYPD4Q6UWN0 246 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 ZBTB46Q86UZ6 589 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 LRP11Q86VZ4 500 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 C10orf67Q8IYJ2 551 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 WFDC11Q8NEX6 87 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 OR1J1Q8NGS3 322 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 OR6K6Q8NGW6 343 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 IGFBPL1Q8WX77 278 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 POM121L2Q96KW2 1035 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 DDOQ99489 341 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 GSX2Q9BZM3 304 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 OR51V1Q9H2C8 321 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 CMC2Q9NRP2 79 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 TVP23BQ9NYZ1 205 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 DUSP13Q9UII6 198 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 OAZ3Q9UMX2 235 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 GRIP1Q9Y3R0 1128 aa9.56□□□□□ -0.88
LIG1-211ENST00000596457 B9A039 149 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 PRR23D1E9PI22 279 aaPredicted RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 H3BNX3 289 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 OVOL3O00110 214 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 SSX4O60224 188 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 BAG2O95816 211 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 HMGN1P05114 100 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 PRR23D2P0DMB1 279 aaPredicted RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 SPI1P17947 270 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 PAICSP22234 425 aaKnown RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 FMO3P31513 532 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 GLRXP35754 106 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 UCP2P55851 309 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 SNAPC1Q16533 368 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 KCNMB1Q16558 191 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 SWI5Q1ZZU3 235 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 MST1LQ2TV78 715 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 KLHL12Q53G59 568 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 CCDC92Q53HC0 331 aaPredicted RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 SPATA46Q5T0L3 261 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 PLBD1Q6P4A8 553 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 GJC3Q8NFK1 279 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 SLC26A10Q8NG04 563 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 DNAJC9Q8WXX5 260 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 Q96MF0 132 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 PITX2Q99697 317 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 WACQ9BTA9 647 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 RBM4Q9BWF3 364 aaKnown RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 HCAR1Q9BXC0 346 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 MRPL37Q9BZE1 423 aaKnown RBP9.55□□□□□ -0.88
LIG1-211ENST00000596457 GRIP2Q9C0E4 1043 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 RIBC2Q9H4K1 309 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 ZNF442Q9H7R0 627 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 S100A14Q9HCY8 104 aa9.55□□□□□ -0.88
LIG1-211ENST00000596457 DYNLRB1Q9NP97 96 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms