RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	RFPL4B	Q6ZWI9	263 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	NDUFA11	Q86Y39	141 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	C1orf87	Q8N0U7	546 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	LRRC18	Q8N456	261 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	CCDC63	Q8NA47	563 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	PNLDC1	Q8NA58	520 aa	Known RBP	6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	WFDC9	Q8NEX5	89 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	OR4C13	Q8NGP0	309 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	OR5R1	Q8NH85	324 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	OR2T6	Q8NHC8	308 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	NPRL2	Q8WTW4	380 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	SLC35B4	Q969S0	331 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	SLC25A44	Q96H78	314 aa	Predicted RBP	6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	PKNOX2	Q96KN3	472 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	C3orf30	Q96M34	536 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	EPYC	Q99645	322 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	SPATA9	Q9BWV2	254 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	TSPYL1	Q9H0U9	437 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	SIRPD	Q9H106	197 aa		6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	MRPL39	Q9NYK5	338 aa	Known RBP	6.98	□□□□□ -1.29
LINC00649-208	ENST00000596365	IGKV1D-42	A0A075B6H8	117 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	LCE6A	A0A183	80 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	LRRC30	A6NM36	301 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	C11orf98	E9PRG8	122 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ATP8B1	O43520	1251 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	PLIN3	O60664	434 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	QDPR	P09417	244 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ADORA3	P0DMS8	318 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	VSIG10L2	P0DP72	767 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	GCA	P28676	217 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	MSX2	P35548	267 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ETV4	P43268	484 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	HOXC5	Q00444	222 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	CASP8	Q14790	479 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	TAF11	Q15544	211 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ZNF181	Q2M3W8	571 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ARL9	Q6T311	187 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	LYPD2	Q6UXB3	125 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	SLC35D2	Q76EJ3	337 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	C10orf53	Q8N6V4	93 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	TRIML2	Q8N7C3	387 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	DTX3	Q8N9I9	347 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	ZNF420	Q8TAQ5	688 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	TECTB	Q96PL2	329 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	P2RX2	Q9UBL9	471 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365	IFT52	Q9Y366	437 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365		U3KQE9	123 aa		6.97	□□□□□ -1.29
LINC00649-208	ENST00000596365		A0A1B0GWA3	101 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	OR6A2	O95222	327 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	C1QC	P02747	245 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	PGA4	P0DJD7	388 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	PGA3	P0DJD8	388 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ZNF32	P17041	273 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	KITLG	P21583	273 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	TUBG1	P23258	451 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	SRP9	P49458	86 aa	Known RBP	6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	CRISP3	P54108	245 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	CLRN1	P58418	232 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	KRTAP10-11	P60412	298 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	SLC7A5	Q01650	507 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	EMX2	Q04743	252 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	MAPK11	Q15759	364 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	RUNDC3A	Q59EK9	446 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ALG10B	Q5I7T1	473 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	C10orf107	Q8IVU9	208 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	PDZD9	Q8IXQ8	264 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	LSMEM1	Q8N8F7	131 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ATG16L2	Q8NAA4	619 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	PAPD5	Q8NDF8	572 aa	Known RBP	6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	NPEPL1	Q8NDH3	523 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	AKR7L	Q8NHP1	331 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	MUC7	Q8TAX7	377 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	TUBGCP3	Q96CW5	907 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	CLPTM1L	Q96KA5	538 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	C4orf45	Q96LM5	186 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	MOGAT1	Q96PD6	335 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ZNF607	Q96SK3	696 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	RANBP3	Q9H6Z4	567 aa	Predicted RBP	6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	SIAE	Q9HAT2	523 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	TUBG2	Q9NRH3	451 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	MKS1	Q9NXB0	559 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ASIC5	Q9NY37	505 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	SELENON	Q9NZV5	590 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	ERVK-18	Q9QC07	812 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365	CHST2	Q9Y4C5	530 aa		6.96	□□□□□ -1.3
LINC00649-208	ENST00000596365		A0A0G2JPF8	293 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	CCDC154	A6NI56	674 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	HNRNPCL2	B2RXH8	293 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	HNRNPCL3	B7ZW38	293 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	HNRNPCL1	O60812	293 aa	Known RBP	6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	TRIM13	O60858	407 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	DUS4L	O95620	317 aa	Known RBP	6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	MT-ATP6	P00846	226 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	IGHG1	P01857	330 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	BCHE	P06276	602 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	CHRNG	P07510	517 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	HNRNPCL4	P0DMR1	293 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	CD28	P10747	220 aa		6.95	□□□□□ -1.3
LINC00649-208	ENST00000596365	PSMB10	P40306	273 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms