RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ABHD12BQ7Z5M8 362 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 BTLAQ7Z6A9 289 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 ATCAYQ86WG3 371 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 KLBQ86Z14 1044 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 CNEP1R1Q8N9A8 125 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 RPS4Y2Q8TD47 263 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 ACOXLQ9NUZ1 547 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 TINAGQ9UJW2 476 aa12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 GDF2Q9UK05 429 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-211ENST00000595945 KALRNO60229 2985 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 OGG1O15527 345 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 ITGA5P08648 1049 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 TACSTD2P09758 323 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 HSMCR30P0CW71 290 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 B4GALT1P15291 398 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 OPRL1P41146 370 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 TGM4P49221 684 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 RGS6P49758 472 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 TAS2R43P59537 309 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 FAPQ12884 760 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 AQP6Q13520 282 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 KCTD18Q6PI47 426 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 C3P1Q6ZMU1 363 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 ZNF813Q6ZN06 617 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 RHOUQ7L0Q8 258 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 PHC2Q8IXK0 858 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 ZNF679Q8IYX0 411 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 UBE2J2Q8N2K1 259 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 HAVCR2Q8TDQ0 301 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 FBXO17Q96EF6 278 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 DMRTA2Q96SC8 542 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 WACQ9BTA9 647 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 FUNDC2Q9BWH2 189 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 SFXN3Q9BWM7 321 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 FAM192AQ9GZU8 254 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 C1orf198Q9H425 327 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 PNRC2Q9NPJ4 139 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 TRIM36Q9NQ86 728 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 GNG8Q9UK08 70 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 POLR1DQ9Y2S0 133 aa12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 SIRT4Q9Y6E7 314 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-211ENST00000595945 PSMD9O00233 223 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CCRL2O00421 344 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ATXN7O15265 892 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ZNF254O75437 659 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SRSF10O75494 262 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 IL18BPO95998 194 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 KRT8P05787 483 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CD1AP06126 327 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CD8BP10966 210 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CD36P16671 472 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CTSSP25774 331 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 GTF2A1P52655 376 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 GBX2P52951 348 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 PER3P56645 1201 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 MRPL28Q13084 256 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 GPR50Q13585 617 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CCDC92Q53HC0 331 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 GPR107Q5VW38 600 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 LIPNQ5VXI9 398 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 FDX2Q6P4F2 183 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SLC16A12Q6ZSM3 486 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 Q6ZT83 130 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SYT9Q86SS6 491 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ANKRD13BQ86YJ7 626 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 CLVS1Q8IUQ0 354 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SKA3Q8IX90 412 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 LRRC18Q8N456 261 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 YIPF7Q8N8F6 280 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 OR2AJ1Q8NGZ0 328 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 BCL2L2Q92843 193 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 BOD1Q96IK1 185 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SH3GL3Q99963 347 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 NAA50Q9GZZ1 169 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 NDUFB11Q9NX14 153 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 IKZF2Q9UKS7 526 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 PROCRQ9UNN8 238 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 SF3B6Q9Y3B4 125 aaKnown RBP12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 GRIP1Q9Y3R0 1128 aa12.92□□□□□ -0.34
SHKBP1-211ENST00000595945 E9PLN8 166 aa12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 RER1O15258 196 aa12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 COX5AP20674 150 aa12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 IGHV1-2P23083 117 aa12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 CDK5R1Q15078 307 aa12.91□□□□□ -0.34
SHKBP1-211ENST00000595945 CCDC58Q4VC31 144 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms