RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 M0R1B8 84 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 RER1O15258 196 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 SELENOFO60613 162 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 WBP4O75554 376 aaKnown RBP19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 RAB36O95755 333 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 SERPINA5P05154 406 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 IDH3GP51553 393 aaPredicted RBP19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 IL5RAQ01344 420 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 RAB39AQ14964 217 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 AKR7LQ8NHP1 331 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 POLR1DQ9Y2S0 133 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 HSPE1-MOB4S4R3N1 261 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 FAM221AA4D161 298 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 CECR9P0C854 216 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 BSPH1Q075Z2 132 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 CCDC92Q53HC0 331 aaPredicted RBP19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 BEX5Q5H9J7 111 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 NCMAPQ5T1S8 102 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 LCN1P1Q5VSP4 162 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 DPY19L4Q7Z388 723 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 SETD9Q8NE22 299 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 RFKQ969G6 155 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 PLPPR2Q96GM1 343 aa19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 WARS2Q9UGM6 360 aaKnown RBP19.59■□□□□ 0.73
SNRNP70-204ENST00000595231 HEATR1Q9H583 2144 aaKnown RBP19.58■□□□□ 0.73
SNRNP70-204ENST00000595231 A6NNC1 897 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 CD40P25942 277 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 SCRN3Q0VDG4 424 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 ZNF774Q6NX45 483 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 TMEM108Q6UXF1 575 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 CFAP77Q6ZQR2 320 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 C8orf59Q8N0T1 100 aaPredicted RBP19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 ZNF295-AS1Q8N0V1 137 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 GJC3Q8NFK1 279 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 OR6N2Q8NGY6 317 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 CNIH3Q8TBE1 160 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 SMAP2Q8WU79 429 aaPredicted RBP19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 FBLIM1Q8WUP2 373 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 MAP6Q96JE9 813 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 ESRP2Q9H6T0 727 aaKnown RBP19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 CLN6Q9NWW5 311 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 GDF2Q9UK05 429 aaPredicted RBP19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 ABCA4P78363 2273 aa19.58■□□□□ 0.72
SNRNP70-204ENST00000595231 SPARCP09486 303 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 PTAFRP25105 342 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 NAA10P41227 235 aaPredicted RBP19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 HSPA13P48723 471 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 TMED1Q13445 227 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 VASH1Q7L8A9 365 aaPredicted RBP19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 Q96MT0 163 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 HS3ST6Q96QI5 342 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 ADGRL4Q9HBW9 690 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■■□□□ 12.1
SNRNP70-204ENST00000595231 HRNRQ86YZ3 2850 aaPredicted RBP19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 BAHCC1Q9P281 2608 aa19.57■□□□□ 0.72
SNRNP70-204ENST00000595231 SGCEO43556 437 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 TMCC2O75069 709 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 MRPL3P09001 348 aaKnown RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 APEX1P27695 318 aaKnown RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 SMN1Q16637 294 aaKnown RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 SLC16A9Q7RTY1 509 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 DCXRQ7Z4W1 244 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 OR10S1Q8NGN2 331 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 OR2AJ1Q8NGZ0 328 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 ST7LQ8TDW4 575 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 PIK3IP1Q96FE7 263 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 ZNF184Q99676 751 aaPredicted RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 PNRC2Q9NPJ4 139 aaKnown RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 PLEK2Q9NYT0 353 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 FBXL3Q9UKT7 428 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 SYNGR3O43761 229 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 HCCSP53701 268 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 NAAAQ02083 359 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 PLP2Q04941 152 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 CDK5R2Q13319 367 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 LAIR2Q6ISS4 152 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 SHFQ7M4L6 423 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 THAP5Q7Z6K1 395 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 ALDH16A1Q8IZ83 802 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 OTOSQ8NHW6 89 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 CNN2Q99439 309 aaKnown RBP19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 ANKRD60Q9BZ19 345 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 AMBNQ9NP70 447 aa19.56■□□□□ 0.72
SNRNP70-204ENST00000595231 HECTD1Q9ULT8 2610 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 LOC100509620A0A075B734 347 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 SBK2P0C263 348 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 MTNR1AP48039 350 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 NUDT6P53370 316 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 NR1H2P55055 460 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 SPOCK1Q08629 439 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 TMEM154Q6P9G4 183 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 CDC20BQ86Y33 519 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 OR51G2Q8NGK0 314 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 TMEM204Q9BSN7 226 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 C1orf198Q9H425 327 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 RAB26Q9ULW5 256 aa19.55■□□□□ 0.72
SNRNP70-204ENST00000595231 CENPEQ02224 2701 aa19.54■□□□□ 0.72
SNRNP70-204ENST00000595231 IQCMA0A1B0GVH7 501 aa19.54■□□□□ 0.72
SNRNP70-204ENST00000595231 OR6C6A6NF89 314 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms