RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MFGE8Q08431 387 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 ACKR1Q16570 336 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 PARM1Q6UWI2 310 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ZNF704Q6ZNC4 412 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 LINC00518Q8N0U6 118 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ZNF524Q96C55 264 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ELF4Q99607 663 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 PDCD10Q9BUL8 212 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 NUDT9Q9BW91 350 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 RAB22AQ9UL26 194 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 RHBDD3Q9Y3P4 386 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ZNF175Q9Y473 711 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 MMACHCQ9Y4U1 282 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 LRP12Q9Y561 859 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 MRPS18BQ9Y676 258 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 CPED1A4D0V7 1026 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 SULT2B1O00204 365 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
VRK3-209ENST00000594948 SLC16A7O60669 478 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ATG12O94817 140 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 CRABP1P29762 137 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 CASRP41180 1078 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 DNASE1L1P49184 302 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 GSK3AP49840 483 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ADAM8P78325 824 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 DEFA5Q01523 94 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ZNF117Q03924 483 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 EIF2B1Q14232 305 aaKnown RBP11.89□□□□□ -0.51
VRK3-209ENST00000594948 ZNF260Q3ZCT1 412 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
VRK3-209ENST00000594948 DEGS2Q6QHC5 323 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 C5orf46Q6UWT4 87 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ZNF813Q6ZN06 617 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 C17orf107Q6ZR85 190 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 OR13H1Q8NG92 308 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 FGF14Q92915 247 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 PHB2Q99623 299 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 CDC6Q99741 560 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 CMKLR1Q99788 373 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 PTDSS2Q9BVG9 487 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 ZNF471Q9BX82 626 aaPredicted RBP11.89□□□□□ -0.51
VRK3-209ENST00000594948 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
VRK3-209ENST00000594948 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
VRK3-209ENST00000594948 C9orf170A2RU37 121 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 F8VVB4 439 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 F8VWA3 439 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 H3BSH0 61 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 NPIPB7O75200 414 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 SLC25A12O75746 678 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 GP1BBP13224 206 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 MYOGP15173 224 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PGCP20142 388 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 GABRA4P48169 554 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 NAAAQ02083 359 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TAF13Q15543 124 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 PNLIPRP3Q17RR3 467 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 FAM74A1Q5RGS3 127 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TMEM244Q5VVB8 128 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 OR13C3Q8NGS6 347 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 OR6S1Q8NH40 331 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PTPMT1Q8WUK0 201 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 PPP1R1CQ8WVI7 109 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 ADIPOR1Q96A54 375 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TCEAL2Q9H3H9 227 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 FBXO4Q9UKT5 387 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 GTF2A1LQ9UNN4 478 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 THADAQ6YHU6 1953 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TRBV6-7A0A0A0MS04 114 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 FAM74A7A6NL05 159 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 C11orf98E9PRG8 122 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PRAMEF26H0Y7S4 382 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 ZNF28P17035 718 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PRKACAP17612 351 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 PRKXP51817 358 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 ATP1B3P54709 279 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 TAS2R31P59538 309 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 MRPS21P82921 87 aaKnown RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 PCK2Q16822 640 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 C10orf91Q5T1B1 145 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 ELP2Q6IA86 826 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 SLC22A18ASQ8N1D0 253 aa11.88□□□□□ -0.51
VRK3-209ENST00000594948 FAM160A2Q8N612 972 aaPredicted RBP11.88□□□□□ -0.51
VRK3-209ENST00000594948 DTWD2Q8NBA8 298 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms