RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
VRK3-207ENST00000594092 RORCP51449 518 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 ROM1Q03395 351 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 SGCAQ16586 387 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 KRTCAP3Q53RY4 240 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 LIPNQ5VXI9 398 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 KCTD18Q6PI47 426 aaPredicted RBP13.39□□□□□ -0.27
VRK3-207ENST00000594092 NUFIP2Q7Z417 695 aaKnown RBP13.39□□□□□ -0.27
VRK3-207ENST00000594092 OR52N5Q8NH56 324 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 CPT1CQ8TCG5 803 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 GHSRQ92847 366 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
VRK3-207ENST00000594092 MED18Q9BUE0 208 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 LINC00470Q9BZP3 86 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 SNTG1Q9NSN8 517 aa13.39□□□□□ -0.27
VRK3-207ENST00000594092 MAP1BP46821 2468 aaKnown RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 AHRRA9YTQ3 701 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 RPP14O95059 124 aaKnown RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 MSR1P21757 451 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 AGTR1P30556 359 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 LRRN1Q6UXK5 716 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 TMEM91Q6ZNR0 172 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 SPATC1Q76KD6 591 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 ZNF679Q8IYX0 411 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 CISD2Q8N5K1 135 aaKnown RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 OR6Q1Q8NGQ2 317 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 ABHD4Q8TB40 342 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 NXF2Q9GZY0 626 aaKnown RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 NELFAQ9H3P2 528 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 SLC7A10Q9NS82 523 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
VRK3-207ENST00000594092 DSPP15924 2871 aaKnown RBP13.38□□□□□ -0.27
VRK3-207ENST00000594092 TLN1Q9Y490 2541 aaKnown RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 GPRIN2O60269 458 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 SDC2P34741 201 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 LSM6P62312 80 aaKnown RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 MRPS34P82930 218 aaKnown RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 MXD1Q05195 221 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 CEACAM16Q2WEN9 425 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 ACSF3Q4G176 576 aaPredicted RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 MED12LQ86YW9 2145 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 SLC25A46Q96AG3 418 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 APH1AQ96BI3 265 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 GMPPAQ96IJ6 420 aaPredicted RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 MAP6Q96JE9 813 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 MROQ9BYG7 248 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 PRORYQ9H606 182 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 ELOVL3Q9HB03 270 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 GLRX2Q9NS18 164 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 GDF2Q9UK05 429 aaPredicted RBP13.37□□□□□ -0.27
VRK3-207ENST00000594092 GTF3C1Q12789 2109 aa13.37□□□□□ -0.27
VRK3-207ENST00000594092 OR6C65A6NJZ3 312 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 CASKO14936 926 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 SS18L1O75177 396 aaPredicted RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 KRT33AO76009 404 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 INHBBP09529 407 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 OPRL1P41146 370 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 TDGF1P3P51864 188 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 ENDOGQ14249 297 aaKnown RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 INSL4Q14641 139 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 KRT77Q7Z794 578 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 KDF1Q8NAX2 398 aaPredicted RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 OR2AJ1Q8NGZ0 328 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 RPS4Y2Q8TD47 263 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 RNF133Q8WVZ7 376 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 S100ZQ8WXG8 99 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 WNT2BQ93097 391 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 TPK1Q9H3S4 243 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 C1orf198Q9H425 327 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 TMEM38BQ9NVV0 291 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 ASH2LQ9UBL3 628 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 S100A5P33763 92 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 BMXP51813 675 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 NANOS3P60323 173 aaKnown RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 DCTN2Q13561 401 aaKnown RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 ALKBH1Q13686 389 aaKnown RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 ACSM3Q53FZ2 586 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 PAMR1Q6UXH9 720 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 CFAP77Q6ZQR2 320 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 CEACAM19Q7Z692 300 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 ZNF100Q8IYN0 542 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 TEX19Q8NA77 164 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 OR10S1Q8NGN2 331 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 HSD17B8Q92506 261 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 PLGRKTQ9HBL7 147 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 HMG20AQ9NP66 347 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 CRNNQ9UBG3 495 aaPredicted RBP13.36□□□□□ -0.27
VRK3-207ENST00000594092 LRP12Q9Y561 859 aa13.36□□□□□ -0.27
VRK3-207ENST00000594092 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
VRK3-207ENST00000594092 A0A075B6Q4 140 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 RPL36A-HNRNPH2H7BZ11 118 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 SC5DO75845 299 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms