RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 PCGF3Q3KNV8 242 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 PABPC1L2AQ5JQF8 200 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 OR2T5Q6IEZ7 315 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 GLCCI1Q86VQ1 547 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 OR1J1Q8NGS3 322 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 OR2T29Q8NH02 315 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 CLDND2Q8NHS1 167 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF570Q96NI8 536 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 TSPAN32Q96QS1 320 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF416Q9BWM5 594 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 SMURF2Q9HAU4 748 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 NTN4Q9HB63 628 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 DECR2Q9NUI1 292 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 OAZ3Q9UMX2 235 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 HIF3AQ9Y2N7 669 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
CIRBP-241ENST00000593048 NPIPB13A6NJU9 1138 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 NPIPB4C9JG80 1138 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 CDC14BO60729 498 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 NCR1O76036 304 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 IFNW1P05000 195 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 MMP7P09237 267 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 TSPAN19P0C672 248 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF32P17041 273 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 MAGEB1P43366 347 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF133P52736 654 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 DVL1P1P54792 670 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 CTXN1P60606 82 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 RPL27P61353 136 aaKnown RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 TEKQ02763 1124 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 THEM4Q5T1C6 240 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 SHQ1Q6PI26 577 aaKnown RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 UNQ6126/PRO20091Q6UXV3 157 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 FNDC8Q8TC99 324 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 C1orf159Q96HA4 380 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 HSH2DQ96JZ2 352 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 C7orf34Q96L11 122 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 ALG12Q9BV10 488 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 C19orf24Q9BVV8 132 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 GABARAPL1Q9H0R8 117 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 SMPD3Q9NY59 655 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-241ENST00000593048 RHCGQ9UBD6 479 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 A4GNTQ9UNA3 340 aa13.81□□□□□ -0.2
CIRBP-241ENST00000593048 NBEAL1Q6ZS30 2694 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 IGLV3-9A0A075B6K5 115 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 C5orf49A4QMS7 147 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 TFP02787 698 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 GCH1P30793 250 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 GDI2P50395 445 aaKnown RBP13.8□□□□□ -0.2
CIRBP-241ENST00000593048 SMIM11AP58511 58 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 ERVK-25P63136 954 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 GLO1Q04760 184 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 TRAM2Q15035 370 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF718Q3SXZ3 478 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 SLC25A47Q6Q0C1 308 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 VTCN1Q7Z7D3 282 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 OAFQ86UD1 273 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 IGFN1Q86VF2 1251 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 NRMQ8IXM6 262 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 ALDH16A1Q8IZ83 802 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 OR51A7Q8NH64 312 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 ANKRD60Q9BZ19 345 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 LPAR2Q9HBW0 351 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 TREM2Q9NZC2 230 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 UGT2A1Q9Y4X1 527 aa13.8□□□□□ -0.2
CIRBP-241ENST00000593048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.21e-14■■■■□ 24.1
CIRBP-241ENST00000593048 SVEP1Q4LDE5 3571 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 TRAV27A0A087WT01 109 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 IGKV1D-43A0A0B4J1Z2 117 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 A0A1W2PPL8 197 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 J3KTA2 159 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 TCF21O43680 179 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 RHCEP18577 417 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 MAKP20794 623 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 HMGA2P52926 109 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 RAD23AP54725 363 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 PCBD1P61457 104 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 TTC23Q5W5X9 447 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 FAM205BPQ63HN1 556 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 RRM2BQ7LG56 351 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 MEX3DQ86XN8 651 aaKnown RBP13.79□□□□□ -0.2
CIRBP-241ENST00000593048 GALNT4Q8N4A0 578 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 RFLNBQ8N5W9 214 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 FAM86B1Q8N7N1 296 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 TFAP2CQ92754 450 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 NABP1Q96AH0 204 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 TMEM186Q96B77 213 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 SLC29A1Q99808 456 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 YTHDF1Q9BYJ9 559 aaKnown RBP13.79□□□□□ -0.2
CIRBP-241ENST00000593048 REEP1Q9H902 201 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 HIF1ANQ9NWT6 349 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 GRIP1Q9Y3R0 1128 aa13.79□□□□□ -0.2
CIRBP-241ENST00000593048 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms