RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SOX21Q9Y651 276 aaPredicted RBP12.78□□□□□ -0.36
ACTN4-211ENST00000589528 TRBV5-3A0A0A0MS03 114 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 IFNL4K9M1U5 179 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 ICMTO60725 284 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 TAS2R41P59536 307 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 DEFB112Q30KQ8 113 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 AGKQ53H12 422 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 TTMPQ5BVD1 217 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 ARMC4Q5T2S8 1044 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 GPR157Q5UAW9 335 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 BRD3OSQ6XYD6 125 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 NLRC3Q7RTR2 1065 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 PATL1Q86TB9 770 aaKnown RBP12.77□□□□□ -0.37
ACTN4-211ENST00000589528 PTOV1Q86YD1 416 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 ATG16L2Q8NAA4 619 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 OR4D11Q8NGI4 311 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 MOSPD2Q8NHP6 518 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 FNDC8Q8TC99 324 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 RASSF5Q8WWW0 418 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 MAGEB18Q96M61 343 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 TXNIPQ9H3M7 391 aa12.77□□□□□ -0.37
ACTN4-211ENST00000589528 C12orf71A8MTZ7 269 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 SRRM5B3KS81 715 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 DOK2O60496 412 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 WNT2P09544 360 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 KITLGP21583 273 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 MSR1P21757 451 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 TUBG1P23258 451 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 CPT2P23786 658 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 RBM34P42696 430 aaKnown RBP12.76□□□□□ -0.37
ACTN4-211ENST00000589528 HTR5AP47898 357 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 MMP16P51512 607 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 RUNDC3AQ59EK9 446 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 ALG10Q5BKT4 473 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
ACTN4-211ENST00000589528 FAM205BPQ63HN1 556 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 SLC27A4Q6P1M0 643 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 SLC25A47Q6Q0C1 308 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 Q6ZR03 302 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-211ENST00000589528 KLBQ86Z14 1044 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 OR8B3Q8NGG8 313 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 TMEM255BQ8WV15 326 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 COG8Q96MW5 612 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 OR8B2Q96RD0 313 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 CITED1Q99966 193 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 PCDHAC1Q9H158 963 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 MARCH7Q9H992 704 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 ARMCX1Q9P291 453 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 KIF17Q9P2E2 1029 aa12.76□□□□□ -0.37
ACTN4-211ENST00000589528 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■□□□ 13.1
ACTN4-211ENST00000589528 V9GYY5 206 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-211ENST00000589528 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 ZNF205O95201 554 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 MTPNP58546 118 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 PDCD1Q15116 288 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 C1orf94Q6P1W5 598 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 DHDDSQ86SQ9 333 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 ZNF420Q8TAQ5 688 aaPredicted RBP12.75□□□□□ -0.37
ACTN4-211ENST00000589528 TMEM239Q8WW34 195 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NMD3Q96D46 503 aaKnown RBP12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NEIL1Q96FI4 390 aaPredicted RBP12.75□□□□□ -0.37
ACTN4-211ENST00000589528 PRSS27Q9BQR3 290 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NUDT16L1Q9BRJ7 211 aaKnown RBP12.75□□□□□ -0.37
ACTN4-211ENST00000589528 POFUT1Q9H488 388 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 GCM1Q9NP62 436 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 NOX4Q9NPH5 578 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 C20orf141Q9NUB4 165 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 MED31Q9Y3C7 131 aa12.75□□□□□ -0.37
ACTN4-211ENST00000589528 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 LRRC30A6NM36 301 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 NDUFA7O95182 113 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 CYB5R3P00387 301 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-211ENST00000589528 COX5BP10606 129 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 SRP9P49458 86 aaKnown RBP12.74□□□□□ -0.37
ACTN4-211ENST00000589528 BPIFB3P59826 476 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
ACTN4-211ENST00000589528 DLEU7Q6UYE1 221 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 SYT9Q86SS6 491 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 POU5F2Q8N7G0 328 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 CLDN22Q8N7P3 220 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 TAMM41Q96BW9 452 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 C1RLQ9NZP8 487 aa12.74□□□□□ -0.37
ACTN4-211ENST00000589528 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms