RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TSSK2	Q96PF2	358 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	FANCF	Q9NPI8	374 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	NDRG3	Q9UGV2	375 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318		A0A087WZY1	265 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	RNF13	O43567	381 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZIC3	O60481	467 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	IGHM	P01871	453 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	H2AFB2	P0C5Z0	115 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	CXCL3	P19876	107 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SSTR2	P30874	369 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	EIF1	P41567	113 aa	Known RBP	13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	DNASE1L1	P49184	302 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	MTNR1B	P49286	362 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	DIO1	P49895	249 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	NOVA1	P51513	510 aa	Known RBP	13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZP4	Q12836	540 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	POU4F2	Q12837	409 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	MYBPH	Q13203	477 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ACKR1	Q16570	336 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SLC35D3	Q5M8T2	416 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	KLHL36	Q8N4N3	616 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ARIH2OS	Q8N7S6	290 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SMPDL3B	Q92485	455 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	IP6K3	Q96PC2	410 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	TBX5	Q99593	518 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	TMEM185B	Q9H7F4	350 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	BRD7	Q9NPI1	651 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SERINC1	Q9NRX5	453 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ASPM	Q8IZT6	3477 aa		13.77	□□□□□ -0.2
DDX39A-209	ENST00000589318		F8W036	122 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318		H7C1C5	153 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	SSNA1	O43805	119 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	PLG	P00747	810 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	H2AFB1	P0C5Y9	115 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	TFPI	P10646	304 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	HLA-DOB	P13765	273 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	DPP4	P27487	766 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	CYB561	P49447	251 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	DSCR4	P56555	118 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	RPL27	P61353	136 aa	Known RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	LCN6	P62502	163 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	PITPNA	Q00169	270 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF85	Q03923	595 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	AIMP2	Q13155	320 aa	Known RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	PABPC1L2A	Q5JQF8	200 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	ATP1A1-AS1	Q5TC04	95 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	HBM	Q6B0K9	141 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	LYPD4	Q6UWN0	246 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	BAIAP2L2	Q6UXY1	529 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	H1FNT	Q75WM6	255 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	TMPRSS7	Q7RTY8	843 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	RFLNB	Q8N5W9	214 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR10H4	Q8NGA5	316 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR2T35	Q8NGX2	323 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	SFXN2	Q96NB2	322 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	TXNIP	Q9H3M7	391 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	ISG20L2	Q9H9L3	353 aa	Known RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	INPP5E	Q9NRR6	644 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	DEPP	Q9NTK1	212 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	DLL3	Q9NYJ7	618 aa		13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	ING1	Q9UK53	422 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39A-209	ENST00000589318	TRAV6	A0A075B6T7	132 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	LRRC3C	A6NJW4	275 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	GLCE	O94923	617 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	OPN1LW	P04000	364 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318		P04436	131 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	NMB	P08949	121 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ELK1	P19419	428 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	NPR2	P20594	1047 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	PYCR1	P32322	319 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	PON3	Q15166	354 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ETFDH	Q16134	617 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	SSX6	Q7RTT6	188 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	KDM8	Q8N371	416 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	POMGNT2	Q8NAT1	580 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	SYT14	Q8NB59	555 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	JSRP1	Q96MG2	331 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	C12orf57	Q99622	126 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ALG8	Q9BVK2	526 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	CHST11	Q9NPF2	352 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ALKBH4	Q9NXW9	302 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	DAPL1	A0PJW8	107 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	PDCD5	O14737	125 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	LRRTM2	O43300	516 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	CBR3	O75828	277 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	NEURL1	O76050	574 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	F10	P00742	488 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	ADRB1	P08588	477 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	P2RY4	P51582	365 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	HCCS	P53701	268 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	TSPAN5	P62079	268 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	POLR2G	P62487	172 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	LGALS3BP	Q08380	585 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	DYRK1A	Q13627	763 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	SEZ6L2	Q6UXD5	910 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	WDFY1	Q8IWB7	410 aa		13.76	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR6V1	Q8N148	313 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms