RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SETD9Q8NE22 299 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 CYGBQ8WWM9 190 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 ZNF75AQ96N20 296 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 INTS14Q96SY0 518 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 OR2H1Q9GZK4 316 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 MARCH7Q9H992 704 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 MRPL22Q9NWU5 206 aaKnown RBP17.02■□□□□ 0.32
CIRBP-220ENST00000588917 RNF115Q9Y4L5 304 aa17.02■□□□□ 0.32
CIRBP-220ENST00000588917 POLQO75417 2590 aa17.02■□□□□ 0.31
CIRBP-220ENST00000588917 TACC2O95359 2948 aa17.02■□□□□ 0.31
CIRBP-220ENST00000588917 TVP23AA6NH52 213 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 COX5BP10606 129 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 APLNRP35414 380 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 ADARB1P78563 741 aaKnown RBP17.01■□□□□ 0.31
CIRBP-220ENST00000588917 RAB39AQ14964 217 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 MEP1BQ16820 701 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 PCK2Q16822 640 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-220ENST00000588917 RHOXF1Q8NHV9 184 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 LURAP1Q96LR2 239 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 ADI1Q9BV57 179 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 CLN6Q9NWW5 311 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 HAO2Q9NYQ3 351 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 PLEK2Q9NYT0 353 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 WARS2Q9UGM6 360 aaKnown RBP17.01■□□□□ 0.31
CIRBP-220ENST00000588917 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.01■□□□□ 0.31
CIRBP-220ENST00000588917 SPEF1Q9Y4P9 236 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 HSPE1-MOB4S4R3N1 261 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 DCHS2Q6V1P9 2916 aa17.01■□□□□ 0.31
CIRBP-220ENST00000588917 CSMD2Q7Z408 3487 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 ABCD4O14678 606 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 SGCEO43556 437 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 CECR9P0C854 216 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 STOMP27105 288 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 CAPGP40121 348 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 HSPA13P48723 471 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 HIST1H3AP68431 136 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 ECH1Q13011 328 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 TBC1D28Q2M2D7 210 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 HIST2H3PS2Q5TEC6 136 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 SLC22A25Q6T423 547 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 UNQ6126/PRO20091Q6UXV3 157 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 HIST2H3AQ71DI3 136 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 ERI1Q8IV48 349 aaKnown RBP17■□□□□ 0.31
CIRBP-220ENST00000588917 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF454Q8N9F8 522 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 SLC30A7Q8NEW0 376 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 BBS1Q8NFJ9 593 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 IPCEF1Q8WWN9 437 aaPredicted RBP17■□□□□ 0.31
CIRBP-220ENST00000588917 ZMYND19Q96E35 227 aaPredicted RBP17■□□□□ 0.31
CIRBP-220ENST00000588917 TMEM204Q9BSN7 226 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 WDR76Q9H967 626 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 ATPIF1Q9UII2 106 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 LHFPL6Q9Y693 200 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 COMMD3-BMI1R4GMX3 469 aa17■□□□□ 0.31
CIRBP-220ENST00000588917 ANKRD17O75179 2603 aaKnown RBP17■□□□□ 0.31
CIRBP-220ENST00000588917 VSTM5A8MXK1 200 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 SIAH2O43255 324 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 HTR1FP30939 366 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 VHLP40337 213 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 GDI2P50395 445 aaKnown RBP16.99■□□□□ 0.31
CIRBP-220ENST00000588917 CDH11P55287 796 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 NAAAQ02083 359 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 POU4F2Q12837 409 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF691Q5VV52 312 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 SLC18B1Q6NT16 456 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 ARL9Q6T311 187 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 RHOUQ7L0Q8 258 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 TIGD4Q8IY51 512 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 ENTHD1Q8IYW4 607 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 CPEB3Q8NE35 698 aaKnown RBP16.99■□□□□ 0.31
CIRBP-220ENST00000588917 OR4F15Q8NGB8 312 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 UBE2FQ969M7 185 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 YIPF3Q9GZM5 350 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 HDHD2Q9H0R4 259 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 WNT5BQ9H1J7 359 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 CLEC4MQ9H2X3 399 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-220ENST00000588917 NOX3Q9HBY0 568 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 TMEM14AQ9Y6G1 99 aa16.99■□□□□ 0.31
CIRBP-220ENST00000588917 M0R129 80 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 RER1O15258 196 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 DOK2O60496 412 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 SPARCP09486 303 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 LOXP28300 417 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ATP6V1E1P36543 226 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 NUDT6P53370 316 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 IL5RAQ01344 420 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 GALK2Q01415 458 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 DBPQ10586 325 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-220ENST00000588917 GGTLC2Q14390 218 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 RAB35Q15286 201 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ELFN2Q5R3F8 820 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ADAM5Q6NVV9 412 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF704Q6ZNC4 412 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-220ENST00000588917 SLC16A9Q7RTY1 509 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 TMEM200AQ86VY9 491 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF584Q8IVC4 421 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 C1orf174Q8IYL3 243 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 OR6N2Q8NGY6 317 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 AKR7LQ8NHP1 331 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms