RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 HRNRQ86YZ3 2850 aaPredicted RBP11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
PRKCSH-202ENST00000585540 DOK2O60496 412 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 PATE4P0C8F1 98 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 DAPP51397 102 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 UCP2P55851 309 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 FAM209AQ5JX71 171 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 FAHD1Q6P587 224 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 OR6V1Q8N148 313 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC26A10Q8NG04 563 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 NEU4Q8WWR8 484 aaPredicted RBP11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 C11orf40Q8WZ69 217 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 HTRA1Q92743 480 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 COQ7Q99807 217 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 MS4A5Q9H3V2 200 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 TBCCD1Q9NVR7 557 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 SLCO1C1Q9NYB5 712 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 PLEK2Q9NYT0 353 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 REV1Q9UBZ9 1251 aa11.92□□□□□ -0.5
PRKCSH-202ENST00000585540 OR6C68A6NDL8 312 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 OR6C6A6NF89 314 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 G3V2T6 193 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 M0R233 179 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 SYNGR3O43761 229 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 MT-ND5P03915 603 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF823P16415 610 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 APEX1P27695 318 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 THBS4P35443 961 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 LIPAP38571 399 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 HTR5AP47898 357 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 EFNA4P52798 201 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 HIST1H3AP68431 136 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 TEKQ02763 1124 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 DBPQ10586 325 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 ECH1Q13011 328 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 HIST2H3PS2Q5TEC6 136 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 VHLLQ6RSH7 139 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 HIST2H3AQ71DI3 136 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 KRTAP1-3Q8IUG1 177 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 IQCF1Q8N6M8 205 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 STMN2Q93045 179 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 DDOQ99489 341 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 RBM4Q9BWF3 364 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 WNT5BQ9H1J7 359 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 FN3KQ9H479 309 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 RERGLQ9H628 205 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 ASH2LQ9UBL3 628 aa11.91□□□□□ -0.5
PRKCSH-202ENST00000585540 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 NDUFS8O00217 210 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 MITFO75030 526 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CD99P14209 185 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF250P15622 560 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 FMO3P31513 532 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CDKN1AP38936 164 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 NUDT6P53370 316 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CDK5Q00535 292 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 MST1LQ2TV78 715 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 ZNF718Q3SXZ3 478 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 ZMAT1Q5H9K5 638 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 TEX30Q5JUR7 227 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC35D3Q5M8T2 416 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 SLC35F1Q5T1Q4 408 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 PQLC1Q8N2U9 271 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CPEB3Q8NE35 698 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 OR2AJ1Q8NGZ0 328 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 SNX33Q8WV41 574 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 DOK1Q99704 481 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 CDADC1Q9BWV3 514 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 NMNAT2Q9BZQ4 307 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 LRBAP50851 2863 aa11.9□□□□□ -0.5
PRKCSH-202ENST00000585540 USF3Q68DE3 2245 aa11.9□□□□□ -0.51
PRKCSH-202ENST00000585540 C5orf49A4QMS7 147 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 PRODHO43272 600 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 BAG2O95816 211 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 HLA-DQA2P01906 255 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 LCKP06239 509 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 POU1F1P28069 291 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 GCH1P30793 250 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 PPP2R2BQ00005 443 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 CRMP1Q14194 572 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 ELFN2Q5R3F8 820 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 ZNF362Q5T0B9 420 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 KDM4DQ6B0I6 523 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
PRKCSH-202ENST00000585540 DNM1P46Q6ZS02 220 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms