RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DDI2Q5TDH0 399 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 RPTNQ6XPR3 784 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 GALNTL5Q7Z4T8 443 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 GGNQ86UU5 652 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.22□□□□□ -0.93
LIG3-203ENST00000585370 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 MFSD4AQ8N468 514 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 RFLNBQ8N5W9 214 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 Q8NA96 180 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 OR6N1Q8NGY5 312 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 OR2AJ1Q8NGZ0 328 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 OR2G2Q8NGZ5 317 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 OR52N5Q8NH56 324 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 MCHR2Q969V1 340 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 RELTQ969Z4 430 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 KCNS3Q9BQ31 491 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 ABHD6Q9BV23 337 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 BARHL1Q9BZE3 327 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 TPK1Q9H3S4 243 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 SMURF1Q9HCE7 757 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 B3GAT2Q9NPZ5 323 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 SLCO1C1Q9NYB5 712 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 PLEKHB1Q9UF11 243 aaPredicted RBP9.22□□□□□ -0.93
LIG3-203ENST00000585370 KLHDC2Q9Y2U9 406 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 GRIP1Q9Y3R0 1128 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 CMAHPQ9Y471 501 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 CNTRLQ7Z7A1 2325 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 DOPEY1Q5JWR5 2465 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 CSMD1Q96PZ7 3565 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 CPAMD8Q8IZJ3 1885 aa9.21□□□□□ -0.93
LIG3-203ENST00000585370 CREBBPQ92793 2442 aa9.21□□□□□ -0.93
LIG3-203ENST00000585370 OR6C65A6NJZ3 312 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 GPR171O14626 319 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 SMAD9O15198 467 aaKnown RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 CYTIPO60759 359 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 SLC43A1O75387 559 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 RPP14O95059 124 aaKnown RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 SYNGR4O95473 234 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 F10P00742 488 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 BMP4P12644 408 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 PTBP1P26599 531 aaKnown RBP eCLIP9.21□□□□□ -0.94
LIG3-203ENST00000585370 CALRP27797 417 aaKnown RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 PSMB10P40306 273 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 TNFSF10P50591 281 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 ZNF84P51523 738 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 CLDN20P56880 219 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 PPP3R1P63098 170 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 MXD1Q05195 221 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 DBPQ10586 325 aaPredicted RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 LRFN4Q6PJG9 635 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 METAP1DQ6UB28 335 aaPredicted RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 FOXL2NBQ6ZUU3 175 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 CCDC190Q86UF4 302 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 C20orf196Q8IYI0 205 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 FAM109AQ8N4B1 249 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 TMEM251Q8N6I4 163 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 RBMXL3Q8N7X1 1067 aaKnown RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 OR10D3Q8NH80 312 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 GPR148Q8TDV2 347 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 C11orf40Q8WZ69 217 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 ABTB1Q969K4 478 aaPredicted RBP9.21□□□□□ -0.94
LIG3-203ENST00000585370 OR2M2Q96R28 347 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 SLC30A2Q9BRI3 323 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 MRI1Q9BV20 369 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 SLITRK2Q9H156 845 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 C1orf198Q9H425 327 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 RNF122Q9H9V4 155 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 SLC24A3Q9HC58 644 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 FRRS1LQ9P0K9 344 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 LUZP4Q9P127 313 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 CYB5R1Q9UHQ9 305 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 UGT2A1Q9Y4X1 527 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 CACNA1DQ01668 2161 aa9.21□□□□□ -0.94
LIG3-203ENST00000585370 LRBAP50851 2863 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 TRAV17A0A0B4J275 112 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 TRBV5-5A0A0J9YX44 114 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 A0A1W2PPL8 197 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 ISPDA4D126 451 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 ACOD1A6NK06 481 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 OR4C45A6NMZ5 311 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 CTDSP2O14595 271 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 MAGEB4O15481 346 aaPredicted RBP9.2□□□□□ -0.94
LIG3-203ENST00000585370 RGS5O15539 181 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 DHHO43323 396 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 CXCL13O43927 109 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 SLC19A2O60779 497 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 RAMP1O60894 148 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 AGFG2O95081 481 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 ZFPL1O95159 310 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 MPZL1O95297 269 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 GPANK1O95872 356 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 H2BFMP0C1H6 154 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 CLEC2LP0C7M8 214 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 ZNF708P17019 499 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 RAB3BP20337 219 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 NPR2P20594 1047 aa9.2□□□□□ -0.94
LIG3-203ENST00000585370 TNFSF8P32971 234 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms