RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TFAP2AP05549 437 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 MMP7P09237 267 aaPredicted RBP14.13□□□□□ -0.15
SS18-226ENST00000585241 PSMB1P20618 241 aaKnown RBP14.13□□□□□ -0.15
SS18-226ENST00000585241 BMP5P22003 454 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 GNLYP22749 145 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 CD79BP40259 229 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 CAPZA2P47755 286 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 WNT4P56705 351 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 ADORA2A-AS1P86434 159 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 EIF2B1Q14232 305 aaKnown RBP14.13□□□□□ -0.15
SS18-226ENST00000585241 GABRA6Q16445 453 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 TBRG1Q3YBR2 411 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 C9orf135Q5VTT2 229 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 TMEM154Q6P9G4 183 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 DEGS2Q6QHC5 323 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 ZNF367Q7RTV3 350 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 DCXRQ7Z4W1 244 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 CCDC36Q8IYA8 594 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 C17orf78Q8N4C9 275 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 OR10S1Q8NGN2 331 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 OR2AJ1Q8NGZ0 328 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 MUL1Q969V5 352 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 SH3GL3Q99963 347 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 VCX3AQ9NNX9 186 aa14.13□□□□□ -0.15
SS18-226ENST00000585241 PNRC2Q9NPJ4 139 aaKnown RBP14.13□□□□□ -0.15
SS18-226ENST00000585241 MRM2Q9UI43 246 aaKnown RBP14.13□□□□□ -0.15
SS18-226ENST00000585241 PCNX1Q96RV3 2341 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 ARPC4-TTLL3A0A0A6YYG9 625 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 WNT11O96014 354 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 UQCRFS1P47985 274 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 ALDH3B2P48448 385 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 NR1H2P55055 460 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 PCBD1P61457 104 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 ACSM1Q08AH1 577 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 SCRN3Q0VDG4 424 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 DOC2BQ14184 412 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 IGFBP7Q16270 282 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 SLC25A35Q3KQZ1 300 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 C4orf17Q53FE4 359 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 SFRP5Q5T4F7 317 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 C1QTNF12Q5T7M4 302 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 OR2G6Q5TZ20 316 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 OR7E24Q6IFN5 339 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 MTFR2Q6P444 385 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 KCTD18Q6PI47 426 aaPredicted RBP14.12□□□□□ -0.15
SS18-226ENST00000585241 CORO6Q6QEF8 472 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 TMPRSS11AQ6ZMR5 421 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 CFAP77Q6ZQR2 320 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 PLEKHG7Q6ZR37 379 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 SLC16A14Q7RTX9 510 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 KCTD20Q7Z5Y7 419 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 ZNF679Q8IYX0 411 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 LRRC18Q8N456 261 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 GJC3Q8NFK1 279 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 THEM6Q8WUY1 208 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 CCDC120Q96HB5 630 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 OR5M11Q96RB7 305 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 ISYNA1Q9NPH2 558 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 DDX28Q9NUL7 540 aaKnown RBP14.12□□□□□ -0.15
SS18-226ENST00000585241 ELOVL5Q9NYP7 299 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 CACNA1CQ13936 2221 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 HIVEP3Q5T1R4 2406 aa14.12□□□□□ -0.15
SS18-226ENST00000585241 RER1O15258 196 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 ZNF254O75437 659 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 LYZL6O75951 148 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 MT-ND5P03915 603 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 LCKP06239 509 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 ZNF32P17041 273 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 CHRNB4P30926 498 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 OPRL1P41146 370 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 BDH1Q02338 343 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 BLMHQ13867 455 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 SPHARQ15513 63 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 FBXL19-AS1Q494R0 122 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 SLC36A2Q495M3 483 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 CCDC92Q53HC0 331 aaPredicted RBP14.11□□□□□ -0.15
SS18-226ENST00000585241 SYT6Q5T7P8 510 aaPredicted RBP14.11□□□□□ -0.15
SS18-226ENST00000585241 STAC2Q6ZMT1 411 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 FJX1Q86VR8 437 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 CXorf67Q86X51 503 aaPredicted RBP14.11□□□□□ -0.15
SS18-226ENST00000585241 FGFBP3Q8TAT2 258 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 HAVCR2Q8TDQ0 301 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 SNX33Q8WV41 574 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 SPRYD4Q8WW59 207 aaPredicted RBP14.11□□□□□ -0.15
SS18-226ENST00000585241 ASB5Q8WWX0 329 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 SLAMF6Q96DU3 332 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 C4orf36Q96KX1 117 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 COG8Q96MW5 612 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 KCNN2Q9H2S1 579 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 OBP2BQ9NPH6 170 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 B3GNT2Q9NY97 397 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 ATPIF1Q9UII2 106 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 TIMM10BQ9Y5J6 103 aa14.11□□□□□ -0.15
SS18-226ENST00000585241 FAM208BQ5VWN6 2430 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 A0A096LPE4 126 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 A0A1W2PPZ6 126 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 ZNF503-AS2A6NEH8 195 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 METTL15A6NJ78 407 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 EEF1E1-BLOC1S5C9J1V9 151 aa14.1□□□□□ -0.15
SS18-226ENST00000585241 ZNF878C9JN71 531 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms