RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IGHV1-45A0A0A0MS14 117 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 M0QYG6 137 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 ANGPTL7O43827 346 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 LCATP04180 440 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 PIPP12273 146 aaPredicted RBP9.17□□□□□ -0.94
RFFL-212ENST00000584655 TGM1P22735 817 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 HBMQ6B0K9 141 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 SLC25A25Q6KCM7 469 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 RPL13AP3Q6NVV1 102 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 MZT2AQ6P582 158 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 TOMM5Q8N4H5 51 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 SGCZQ96LD1 299 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 THAP7Q9BT49 309 aaPredicted RBP9.17□□□□□ -0.94
RFFL-212ENST00000584655 CHST11Q9NPF2 352 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 HSPB11Q9Y547 144 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 SYT7O43581 403 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 TACSTD2P09758 323 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 DUSP1P28562 367 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 FOXC1Q12948 553 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 CFAP77Q6ZQR2 320 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 PPP1R32Q7Z5V6 425 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 MCEMP1Q8IX19 187 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 CAMK2AQ9UQM7 478 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 PI3P19957 117 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 CSNK1A1P48729 337 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 ALKBH1Q13686 389 aaKnown RBP9.16□□□□□ -0.94
RFFL-212ENST00000584655 C3orf33Q6P1S2 294 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 C17orf107Q6ZR85 190 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 CMTM4Q8IZR5 234 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 POC1BQ8TC44 478 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 RGP1Q92546 391 aaPredicted RBP9.16□□□□□ -0.94
RFFL-212ENST00000584655 PGAM5Q96HS1 289 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 SDHCQ99643 169 aaPredicted RBP9.16□□□□□ -0.94
RFFL-212ENST00000584655 PCED1AQ9H1Q7 454 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 FZR1Q9UM11 496 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 MEIOCA2RUB1 952 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 SIX6O95475 246 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 HLA-HP01893 362 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 DCTDP32321 178 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 RBM34P42696 430 aaKnown RBP9.16□□□□□ -0.94
RFFL-212ENST00000584655 HOXA4Q00056 320 aaPredicted RBP9.16□□□□□ -0.94
RFFL-212ENST00000584655 PLPPR5Q32ZL2 321 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 GPALPP1Q8IXQ4 340 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 OR4S1Q8NGB4 309 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 TBC1D24Q9ULP9 559 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 ZNF281Q9Y2X9 895 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 PCDHGB7Q9Y5F8 929 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 LOC107986453A0A1B0GWG9 222 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 TRDV1A0A1B0GX56 115 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 IRGMA1A4Y4 181 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 ZNF879B4DU55 563 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 MPIG6BO95866 241 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 NPR2P20594 1047 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 MNDAP41218 407 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 IL11RAQ14626 422 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 OR1C1Q15619 314 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 AGAP7PQ5VUJ5 663 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 C11orf88Q6PI97 169 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 MRGPREQ86SM8 312 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 KMT5CQ86Y97 462 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 GRAMD2AQ8IUY3 354 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 SLAMF6Q96DU3 332 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 SMIM19Q96E16 107 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 TXNIPQ9H3M7 391 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 POLE3Q9NRF9 147 aa9.16□□□□□ -0.94
RFFL-212ENST00000584655 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 PRR33A8MZF0 331 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 EIF4E2O60573 245 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 ARL6IP5O75915 188 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 FAHP16930 419 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SUCLG1P53597 346 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 EFNB1P98172 346 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 FAPQ12884 760 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 PHYHD1Q5SRE7 291 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR2M3Q8NG83 312 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR52N1Q8NH53 320 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR52I2Q8NH67 350 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SRXN1Q9BYN0 137 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 UCK1Q9HA47 277 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 KLHL21Q9UJP4 597 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SPATA2Q9UM82 520 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 CHCHD2Q9Y6H1 151 aaPredicted RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 V9GYH0 126 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SVEP1Q4LDE5 3571 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 LRBAP50851 2863 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 FAM172BPA6NC97 362 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 UPK3AO75631 287 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 IL1AP01583 271 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SELEP16581 610 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ZNF20P17024 532 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ALOX5APP20292 161 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 KIR2DL3P43628 341 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ACTC1P68032 377 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms