RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472		A0A1W2PPR1	153 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TVP23A	A6NH52	213 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FARS2	O95363	451 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	WNT11	O96014	354 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	DNASE1	P24855	282 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LSM6	P62312	80 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TMED1	Q13445	227 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	GGTLC2	Q14390	218 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MEP1B	Q16820	701 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NCMAP	Q5T1S8	102 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OTP	Q5XKR4	325 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LAIR2	Q6ISS4	152 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SKA3	Q8IX90	412 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TIGD4	Q8IY51	512 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LRRC18	Q8N456	261 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	WDR31	Q8NA23	367 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OR52N5	Q8NH56	324 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SH3GL3	Q99963	347 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MARCH7	Q9H992	704 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	EMC7	Q9NPA0	242 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HAO2	Q9NYQ3	351 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF224	Q9NZL3	707 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	3e-7	■■■□□ 17.6
CSNK1D-223	ENST00000584472	LRRC42	Q9Y546	428 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	COMMD3-BMI1	R4GMX3	469 aa		13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PRRC2A	P48634	2157 aa	Known RBP	13.92	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SNTN	A6NMZ2	147 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	RAF1	P04049	648 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CD3E	P07766	207 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CST2	P09228	141 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF823	P16415	610 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NUDT6	P53370	316 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ENDOG	Q14249	297 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SMN1	Q16637	294 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TMEM108	Q6UXF1	575 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CCDC36	Q8IYA8	594 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OR10H5	Q8NGA6	315 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF416	Q9BWM5	594 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	WDR76	Q9H967	626 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NPAP1	Q9NZP6	1156 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	RNF115	Q9Y4L5	304 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NF1	P21359	2839 aa		13.91	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SELENOF	O60613	162 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	DBT	P11182	482 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PTAFR	P25105	342 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MTNR1A	P48039	350 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ENTPD1	P49961	510 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	UBE2N	P61088	152 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ADAM8	P78325	824 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF91	Q05481	1191 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	BSPH1	Q075Z2	132 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PCK2	Q16822	640 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TEX30	Q5JUR7	227 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC16A14	Q7RTX9	510 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ERI1	Q8IV48	349 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FGFBP3	Q8TAT2	258 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NRGN	Q92686	78 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FBXO17	Q96EF6	278 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	INTS14	Q96SY0	518 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TMUB1	Q9BVT8	246 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ADGRL4	Q9HBW9	690 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	AMBN	Q9NP70	447 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	KCNG2	Q9UJ96	466 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PCDHGB5	Q9Y5G0	923 aa		13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK1D-223	ENST00000584472		A0A1W2PR80	420 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	ZNF503-AS2	A6NEH8	195 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	DPRX	A6NFQ7	191 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	C12orf71	A8MTZ7	269 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	UBL3	O95164	117 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	HLA-H	P01893	362 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	MRPL3	P09001	348 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	MMP7	P09237	267 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	SBK2	P0C263	348 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	PATE4	P0C8F1	98 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	PSKH1	P11801	424 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	ZNF83	P51522	516 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	TUBA1B	P68363	451 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	TUBA4A	P68366	448 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	POU4F2	Q12837	409 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	MED21	Q13503	144 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	C3orf36	Q3SXR2	165 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	SLC36A2	Q495M3	483 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	C6orf141	Q5SZD1	244 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	KRT80	Q6KB66	452 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	ADAM5	Q6NVV9	412 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	C20orf204	Q6ZNR8	217 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	TUBA1A	Q71U36	451 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	DPPA2	Q7Z7J5	298 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	SYT9	Q86SS6	491 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	TGIF2LY	Q8IUE0	185 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	FAM169B	Q8N8A8	192 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	OR51G2	Q8NGK0	314 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	OR6N2	Q8NGY6	317 aa		13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	NANOS1	Q8WY41	292 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1D-223	ENST00000584472	RNFT2	Q96EX2	444 aa		13.89	□□□□□ -0.19

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