RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 LRR1Q96L50 414 aa8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SORCS2Q96PQ0 1159 aa8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SLC38A2Q96QD8 506 aa8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 VRK1Q99986 396 aaPredicted RBP8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SF3B5Q9BWJ5 86 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FGF20Q9NP95 211 aaPredicted RBP8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TBC1D23Q9NUY8 699 aa8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PLCE1Q9P212 2302 aa8.44□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LOC390937A0A1W2PQ73 354 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZC3H12DA2A288 527 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SLC35F4A4IF30 521 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 B9A039 149 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 H3BMQ9 156 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PRODHO43272 600 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 AKR7A3O95154 331 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SLC2A10O95528 541 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CRYAAP02489 173 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SERPINF1P36955 418 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SLC9A3P48764 834 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 UBE2NP61088 152 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 EGR4Q05215 589 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZNF91Q05481 1191 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OR7A5Q15622 319 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TBCEQ15813 527 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TBRG1Q3YBR2 411 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 HIKESHIQ53FT3 197 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LIPNQ5VXI9 398 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SLC16A12Q6ZSM3 486 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TMEM99Q8N816 258 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OR52I1Q8NGK6 324 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OR51A7Q8NH64 312 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FCGR1BQ92637 280 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PTP4A1Q93096 173 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 MSI2Q96DH6 328 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LGALS12Q96DT0 336 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 BOD1Q96IK1 185 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 COG8Q96MW5 612 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FOXN4Q96NZ1 517 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZNF385AQ96PM9 386 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 DDOQ99489 341 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TSC22D3Q99576 134 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 KATNB1Q9BVA0 655 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FUNDC2Q9BWH2 189 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TEX12Q9BXU0 123 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PTTG2Q9NZH5 202 aa8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 EXOGQ9Y2C4 368 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TRAV27A0A087WT01 109 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 IGHV1-18A0A0C4DH31 117 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OR6C65A6NJZ3 312 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LIPT2A6NK58 231 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 AQP7P3A6NL99 342 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZNF587BE7ETH6 402 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LRRN3E7EW58 273 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CH25HO95992 272 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TGFAP01135 160 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PTHP01270 115 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TSPAN19P0C672 248 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CXCR1P25024 350 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 HTR1FP30939 366 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LIPAP38571 399 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 SRSF2Q01130 221 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 DOC2BQ14184 412 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZNF74Q16587 644 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CTF1Q16619 201 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 KLHL22Q53GT1 634 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TMEM225Q6GV28 225 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OAFQ86UD1 273 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 GPAT4Q86UL3 456 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CPOQ8IVL8 374 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LRRC17Q8N6Y2 441 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 NANOGP1Q8N7R0 232 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZIC4Q8N9L1 334 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LRRC75AQ8NAA5 344 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 OR1K1Q8NGR3 316 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FANK1Q8TC84 345 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 TAAR8Q969N4 342 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 RNFT2Q96EX2 444 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 BCL7BQ9BQE9 202 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ZNF649Q9BS31 505 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 PRRG3Q9BZD7 231 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 RAB1BQ9H0U4 201 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FN3KQ9H479 309 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 MOV10Q9HCE1 1003 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 HINT3Q9NQE9 182 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CA10Q9NS85 328 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 IL20RAQ9UHF4 553 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 CLEC2DQ9UHP7 191 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ENPP5Q9UJA9 477 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 FBXO9Q9UK97 447 aaPredicted RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 BAIAP2Q9UQB8 552 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 LSM2Q9Y333 95 aaKnown RBP8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ARFGEF3Q5TH69 2177 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 MALRD1Q5VYJ5 2156 aa8.42□□□□□ -1.06
CDK5RAP3-227ENST00000583352 ARPC4-TTLL3A0A0A6YYG9 625 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms