RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	IGHV2-70	P01814	119 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	IFNW1	P05000	195 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	EGR1	P18146	543 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	IFNA8	P32881	189 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	LIPA	P38571	399 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	COMP	P49747	757 aa	Predicted RBP	9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ERF	P50548	548 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SEC61A1	P61619	476 aa	Known RBP	9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	PRKCD	Q05655	676 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SLC3A1	Q07837	685 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TRAM2	Q15035	370 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FAM205BP	Q63HN1	556 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114		Q6ZR03	302 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FOXL2NB	Q6ZUU3	175 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	OFCC1	Q8IZS5	231 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	OR5AS1	Q8N127	324 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZDHHC22	Q8N966	263 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	PCYOX1L	Q8NBM8	494 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ITLN1	Q8WWA0	313 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	LZIC	Q8WZA0	190 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	RASD2	Q96D21	266 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114		Q96M85	177 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TMEM106B	Q9NUM4	274 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	GRHPR	Q9UBQ7	328 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	KLHL21	Q9UJP4	597 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	PURG	Q9UJV8	347 aa	Known RBP	9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZDHHC8	Q9ULC8	765 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	NDRG4	Q9ULP0	352 aa	Known RBP	9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	STARD10	Q9Y365	291 aa		9.82	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114		A0A087WUU8	490 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TEX13C	A0A0J9YWL9	993 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	IGHV3-64D	A0A0J9YX35	117 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SGCE	O43556	437 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZNF205	O95201	554 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CD55	P08174	381 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ADH4	P08319	380 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CTLA4	P16410	223 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZNF26	P17031	533 aa	Predicted RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	GSTM3	P21266	225 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	GATA3	P23771	443 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	UBA52	P62987	128 aa	Known RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CDK5R2	Q13319	367 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	AWAT1	Q58HT5	328 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	MEST	Q5EB52	335 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZMAT1	Q5H9K5	638 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ARMCX4	Q5H9R4	360 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ARL9	Q6T311	187 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FKBP9P1	Q75LS8	142 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	VASH1	Q7L8A9	365 aa	Predicted RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TREML1	Q86YW5	311 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SIGLECL1	Q8N7X8	197 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FNDC8	Q8TC99	324 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ACOT11	Q8WXI4	607 aa	Predicted RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CMBL	Q96DG6	245 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FAM46A	Q96IP4	442 aa	Known RBP	9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZNF570	Q96NI8	536 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	DIRC2	Q96SL1	478 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	IL20RA	Q9UHF4	553 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CAPN7	Q9Y6W3	813 aa		9.81	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TRAPPC2L	H3BP13	241 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114		H3BSA7	217 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CXCR6	O00574	342 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	XKRY	O14609	159 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	GSTA4	O15217	222 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	WIPF1	O43516	503 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ICMT	O60725	284 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FOXH1	O75593	365 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	GPANK1	O95872	356 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SERPINA1	P01009	418 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FSHB	P01225	129 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CD14	P08571	375 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	DBH	P09172	617 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TNFSF4	P23510	183 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	FPR2	P25090	351 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	LIMS1	P48059	325 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	LIPE	Q05469	1076 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SCRN3	Q0VDG4	424 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	HLX	Q14774	488 aa	Predicted RBP	9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZMYND11	Q15326	602 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZBED5	Q49AG3	693 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	IFI44L	Q53G44	452 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	MBOAT2	Q6ZWT7	520 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZER1	Q7Z7L7	766 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	SYT9	Q86SS6	491 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	C1orf174	Q8IYL3	243 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	BCL6B	Q8N143	479 aa	Predicted RBP	9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	NPEPL1	Q8NDH3	523 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	DEFB108B	Q8NET1	73 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	DVL3	Q92997	716 aa	Predicted RBP	9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	HSH2D	Q96JZ2	352 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	OR2V2	Q96R30	315 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	VIPAS39	Q9H9C1	493 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	DDX28	Q9NUL7	540 aa	Known RBP	9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	TBCCD1	Q9NVR7	557 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ARGLU1	Q9NWB6	273 aa	Predicted RBP	9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	PLEK2	Q9NYT0	353 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	PTTG3P	Q9NZH4	202 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	ZNF69	Q9UC07	566 aa		9.8	□□□□□ -0.84
CDK5RAP3-223	ENST00000582114	CGGBP1	Q9UFW8	167 aa	Predicted RBP	9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms