RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RNF113BQ8IZP6 322 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR4M2Q8NGB6 313 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ST7LQ8TDW4 575 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RASD2Q96D21 266 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 Q96M85 177 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DCLRE1CQ96SD1 692 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 HOPXQ9BPY8 73 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KCTD14Q9BQ13 255 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 POLE4Q9NR33 117 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CYSLTR2Q9NS75 346 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PLEK2Q9NYT0 353 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 IL20RAQ9UHF4 553 aa7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NDRG4Q9ULP0 352 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-211ENST00000578996 A0A0A6YYJ9 748 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SOCS2O14508 198 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SGCEO43556 437 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SLC16A7O60669 478 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CCDC22O60826 627 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 UBOX5O94941 541 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 AVPP01185 164 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CD14P08571 375 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TNFSF4P23510 183 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RBMXP38159 391 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 LIPAP38571 399 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SLC3A1Q07837 685 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KRR1Q13601 381 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FHL1Q13642 323 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 MTX3Q5HYI7 312 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C1orf229Q6ZS94 237 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FOXL2NBQ6ZUU3 175 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C1orf174Q8IYL3 243 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TEX29Q8N6K0 151 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR2Z1Q8NG97 314 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DIRC2Q96SL1 478 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TMPRSS13Q9BYE2 586 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 POFUT1Q9H488 388 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 EFCAB1Q9HAE3 211 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NMNAT1Q9HAN9 279 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 G6PC2Q9NQR9 355 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CGGBP1Q9UFW8 167 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 EGFL7Q9UHF1 273 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ZDHHC8Q9ULC8 765 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TMEM5Q9Y2B1 443 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 POLR1DQ9Y2S0 133 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 FAM32AQ9Y421 112 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 V9GYQ6 96 aa7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PRSS37A4D1T9 235 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 H3BSA7 217 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 IMPA2O14732 288 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DIRAS1O95057 198 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PRSS23O95084 383 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NDUFB2O95178 105 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SBK2P0C263 348 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CTLA4P16410 223 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ZNF26P17031 533 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SDHAP31040 664 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PSG7Q13046 419 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 AQP6Q13520 282 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KRT72Q14CN4 511 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TMPRSS11FQ6ZWK6 438 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 VASH1Q7L8A9 365 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ZER1Q7Z7L7 766 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SYT9Q86SS6 491 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TREML1Q86YW5 311 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR5AS1Q8N127 324 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 BPIFB2Q8N4F0 458 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NPEPL1Q8NDH3 523 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SEMA6DQ8NFY4 1073 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 OR52J3Q8NH60 311 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SLC7A13Q8TCU3 470 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C22orf15Q8WYQ4 148 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SLC7A6Q92536 515 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 SYT4Q9H2B2 425 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 CCDC134Q9H6E4 229 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KRCC1Q9NPI7 259 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 DCAF16Q9NXF7 216 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ADA2Q9NZK5 511 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ASH2LQ9UBL3 628 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 PURGQ9UJV8 347 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 RPS6KA6Q9UK32 745 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 AURKCQ9UQB9 309 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 COA3Q9Y2R0 106 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NPTNQ9Y639 398 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TRBV4-1A0A0J9YWV2 114 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TRIM77I1YAP6 450 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 J3QLI3 93 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 NDUFAB1O14561 156 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GMNNO75496 209 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 KHDRBS3O75525 346 aaKnown RBP7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 GPANK1O95872 356 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 COX5BP10606 129 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 TNFRSF1AP19438 455 aa7.79□□□□□ -1.16
CDK5RAP3-211ENST00000578996 MDH1P40925 334 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms