RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 KCNMB1Q16558 191 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 NKPD1Q17RQ9 610 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 TBC1D28Q2M2D7 210 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PCGF3Q3KNV8 242 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 SLC36A2Q495M3 483 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 LRRC23Q53EV4 343 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ALG10Q5BKT4 473 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 FAM209AQ5JX71 171 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CLEC12AQ5QGZ9 265 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PRR31Q5SQ13 230 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 INTS11Q5TA45 600 aaKnown RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 GKAP1Q5VSY0 366 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ACSM5Q6NUN0 579 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 TMEM53Q6P2H8 277 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 LYPD4Q6UWN0 246 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CFAP77Q6ZQR2 320 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CBLL1Q75N03 491 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 RHOUQ7L0Q8 258 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 DOK3Q7L591 496 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ZER1Q7Z7L7 766 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 C19orf18Q8NEA5 215 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ZNF420Q8TAQ5 688 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ABHD4Q8TB40 342 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 C11orf40Q8WZ69 217 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CCL17Q92583 94 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 HAVCR1Q96D42 359 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CMBLQ96DG6 245 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 HSH2DQ96JZ2 352 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 C4orf45Q96LM5 186 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 GPX7Q96SL4 187 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ALG12Q9BV10 488 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CDADC1Q9BWV3 514 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 BCL2L14Q9BZR8 327 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 FGF23Q9GZV9 251 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 NUAK2Q9H093 628 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 MYLK2Q9H1R3 596 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PRDM13Q9H4Q3 707 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 OCEL1Q9H607 264 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CCDC134Q9H6E4 229 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 SAP30LQ9HAJ7 183 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 NMNAT1Q9HAN9 279 aaPredicted RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PATZ1Q9HBE1 687 aaKnown RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CDH20Q9HBT6 801 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 GCM1Q9NP62 436 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 TMEM106BQ9NUM4 274 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 TBCCD1Q9NVR7 557 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 MRPL22Q9NWU5 206 aaKnown RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ADA2Q9NZK5 511 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 ABCD2Q9UBJ2 740 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 CTSZQ9UBR2 303 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 EGFL7Q9UHF1 273 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PURGQ9UJV8 347 aaKnown RBP3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PCDHB10Q9UN67 800 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PPIAL4AQ9Y536 164 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 PCDHGB1Q9Y5G3 927 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 INSIG2Q9Y5U4 225 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 NPTNQ9Y639 398 aa3.72□□□□□ -1.81
PPP4R1-209ENST00000578329 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 IGHV3OR16-10A0A075B7F0 116 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 TEX13CA0A0J9YWL9 993 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 A0A1B0GW55 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 A0A1W2PRG6 482 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 ELOVL7A1L3X0 281 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 PRSS37A4D1T9 235 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 OR6C68A6NDL8 312 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CEACAM18A8MTB9 384 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CLDN25C9JDP6 229 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 F5H5P2 479 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CXCR6O00574 342 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 SPRY1O43609 319 aaPredicted RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 OR6A2O95222 327 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 PTBP3O95758 552 aaKnown RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 ZNF682O95780 498 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CYB5R3P00387 301 aaPredicted RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 MT-ND5P03915 603 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 HLA-DPB1P04440 258 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CD14P08571 375 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L2P0CJ85 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L3P0CJ86 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L4P0CJ87 422 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L5P0CJ88 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L6P0CJ89 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DUX4L7P0CJ90 424 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 HKR1P10072 659 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 COX5BP10606 129 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 COX4I1P13073 169 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 MMP9P14780 707 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 HNF1AP20823 631 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 MSR1P21757 451 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 CCNOP22674 350 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 RPS27P42677 84 aaKnown RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 RAD52P43351 418 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC9A3P48764 834 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 GDI2P50395 445 aaKnown RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 DAP3P51398 398 aaKnown RBP3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 SLC7A2P52569 658 aa3.71□□□□□ -1.82
PPP4R1-209ENST00000578329 RPS23P62266 143 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms