RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 PTPRQQ9UMZ3 2332 aa13.35□□□□□ -0.27
IFT20-204ENST00000577498 CD8B2A6NJW9 211 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 TMEM212A6NML5 194 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ZNF878C9JN71 531 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ZNF587BE7ETH6 402 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 IL1AP01583 271 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 CST2P09228 141 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 H2BFMP0C1H6 154 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 GABRA1P14867 456 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 NANOS3P60323 173 aaKnown RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 ROR2Q01974 943 aaKnown RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 CEACAM16Q2WEN9 425 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ZNF829Q3KNS6 432 aaPredicted RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 ACSF3Q4G176 576 aaPredicted RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 C22orf42Q6IC83 251 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 OR2A2Q6IF42 318 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 CORO6Q6QEF8 472 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 TMEM91Q6ZNR0 172 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ABHD12BQ7Z5M8 362 aaPredicted RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 ZNF100Q8IYN0 542 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 PHYHIPQ92561 330 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ALKBH3Q96Q83 286 aaPredicted RBP13.34□□□□□ -0.27
IFT20-204ENST00000577498 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ZNF416Q9BWM5 594 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 HDHD5Q9BXW7 423 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 ASH2LQ9UBL3 628 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 R4GMQ9 66 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 A3GALT2U3KPV4 340 aa13.34□□□□□ -0.27
IFT20-204ENST00000577498 OR4C45A6NMZ5 311 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 LRRTM2O43300 516 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 WDR1O75083 606 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 SRSF10O75494 262 aaKnown RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 SC5DO75845 299 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 WNT11O96014 354 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 HOXD4P09016 255 aaPredicted RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 FAM87AP0C7U9 286 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 TGFBR1P36897 503 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 OR3A2P47893 321 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 GUSBP1Q15486 140 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 NSUN5P2Q63ZY6 315 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 CFAP77Q6ZQR2 320 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 LINC00299Q6ZSB3 139 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 ZNF627Q7L945 461 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 NUFIP2Q7Z417 695 aaKnown RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 FGD2Q7Z6J4 655 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 TEX19Q8NA77 164 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 Q8NA96 180 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 OR10S1Q8NGN2 331 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 ZNF837Q96EG3 531 aaPredicted RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 FOXB1Q99853 325 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 COMMD4Q9H0A8 199 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 RNF167Q9H6Y7 350 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 ZNF71Q9NQZ8 489 aaPredicted RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 CENPMQ9NSP4 180 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 DDX28Q9NUL7 540 aaKnown RBP13.33□□□□□ -0.28
IFT20-204ENST00000577498 GALNT8Q9NY28 637 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 UPB1Q9UBR1 384 aa13.33□□□□□ -0.28
IFT20-204ENST00000577498 CLPXO76031 633 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 ZFPL1O95159 310 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 FARS2O95363 451 aaKnown RBP13.32□□□□□ -0.28
IFT20-204ENST00000577498 CD8BP10966 210 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 MMP16P51512 607 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 PCBD1P61457 104 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 RPS11P62280 158 aaKnown RBP eCLIP13.32□□□□□ -0.28
IFT20-204ENST00000577498 GRB2P62993 217 aaKnown RBP13.32□□□□□ -0.28
IFT20-204ENST00000577498 SCRN3Q0VDG4 424 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 ACSM3Q53FZ2 586 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 OR7E24Q6IFN5 339 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 KLHL24Q6TFL4 600 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 UNQ9370/PRO34162Q6UXP9 181 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 SPATC1Q76KD6 591 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 PRSS35Q8N3Z0 413 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 OR5M9Q8NGP3 310 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 HSD17B8Q92506 261 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 THRSPQ92748 146 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 DCLRE1CQ96SD1 692 aaKnown RBP13.32□□□□□ -0.28
IFT20-204ENST00000577498 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
IFT20-204ENST00000577498 LUZP4Q9P127 313 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 EMC9Q9Y3B6 208 aa13.32□□□□□ -0.28
IFT20-204ENST00000577498 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 FIGNL2A6NMB9 653 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 LOC110117498-PIK3R3F6TDL0 507 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 RER1O15258 196 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 CNOT4O95628 575 aaKnown RBP13.31□□□□□ -0.28
IFT20-204ENST00000577498 CTSSP25774 331 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 SOX6P35712 828 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 MTNR1BP49286 362 aa13.31□□□□□ -0.28
IFT20-204ENST00000577498 ECH1Q13011 328 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms