RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HCAR1Q9BXC0 346 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ESRP2Q9H6T0 727 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 COA3Q9Y2R0 106 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 ABCA4P78363 2273 aa8.19□□□□□ -1.1
NPLOC4-219ENST00000576713 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 IGHV2OR16-5A0A0B4J2B6 119 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 M0R129 80 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 HS3ST1O14792 307 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 CD8AP01732 235 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 DBHP09172 617 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 OR8G3PP0DMU2 310 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 GAAP10253 952 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 APEHP13798 732 aaKnown RBP8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF32P17041 273 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 PTAFRP25105 342 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 PTDSS1P48651 473 aaKnown RBP8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 RPS6KA3P51812 740 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 CDH11P55287 796 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 RAB1AP62820 205 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 NAAAQ02083 359 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 NPRL3Q12980 569 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 CRMP1Q14194 572 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 SGCAQ16586 387 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 GSG1Q2KHT4 349 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 FAM205BPQ63HN1 556 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 GPR139Q6DWJ6 353 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 TMEM108Q6UXF1 575 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 HDDC2Q7Z4H3 204 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 LNX2Q8N448 690 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC37A3Q8NCC5 494 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 CPEB3Q8NE35 698 aaKnown RBP8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 OR52E2Q8NGJ4 325 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 OR9Q1Q8NGQ5 310 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 AKR7LQ8NHP1 331 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF416Q9BWM5 594 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 RERGLQ9H628 205 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 MED20Q9H944 212 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 SIAEQ9HAT2 523 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 RPRD1BQ9NQG5 326 aaKnown RBP8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 POLE4Q9NR33 117 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 TBC1D23Q9NUY8 699 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 OAZ3Q9UMX2 235 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 AKAP6Q13023 2319 aa8.18□□□□□ -1.1
NPLOC4-219ENST00000576713 ANK3Q12955 4377 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 LOC100509620A0A075B734 347 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 SAC3D1A6NKF1 404 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 FAM183AA6NL82 134 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 XKRYO14609 159 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 TFP02787 698 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 GYPBP06028 91 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF35P13682 527 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ANOS1P23352 680 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 FASP25445 335 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 POU1F1P28069 291 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 PYCR1P32322 319 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 POLR2IP36954 125 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 RPS27P42677 84 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF84P51523 738 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 PSG4Q00888 419 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 GK3PQ14409 553 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZSCAN26Q16670 478 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 FAM27BQ5VT28 67 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC22A25Q6T423 547 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 SLC16A14Q7RTX9 510 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ADCK1Q86TW2 530 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZBTB46Q86UZ6 589 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF611Q8N823 705 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ATG16L2Q8NAA4 619 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 OR51L1Q8NGJ5 315 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 OR5K1Q8NHB7 308 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 C11orf40Q8WZ69 217 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 RBP7Q96R05 134 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 RBM4Q9BWF3 364 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 NMNAT2Q9BZQ4 307 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 GABARAPL1Q9H0R8 117 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 WNT5BQ9H1J7 359 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 YY1AP1Q9H869 796 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 NGBQ9NPG2 151 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 MRPL22Q9NWU5 206 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 CISD1Q9NZ45 108 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 STX18Q9P2W9 335 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 B9D1Q9UPM9 204 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
NPLOC4-219ENST00000576713 G3V2T6 193 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 H3BN98 237 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 GPRIN2O60269 458 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 NDUFS7O75251 213 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 UBL3O95164 117 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 RAF1P04049 648 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 ROS1P08922 2347 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 OSMP13725 252 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 ZNF23P17027 643 aa8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 HOXB6P17509 224 aaKnown RBP8.16□□□□□ -1.1
NPLOC4-219ENST00000576713 GSTM3P21266 225 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms