RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
SCARF1-209ENST00000576012 A0A087WV62 115 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 APBB3O95704 486 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 IFNA6P05013 189 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 CCL5P13501 91 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 ABCD3P28288 659 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 CD96P40200 585 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 EIF1AXP47813 144 aaKnown RBP13.11□□□□□ -0.31
SCARF1-209ENST00000576012 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
SCARF1-209ENST00000576012 CEBPGP53567 150 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 PMPCAQ10713 525 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF77Q15935 545 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 SLC16A9Q7RTY1 509 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 TRAPPC6BQ86SZ2 158 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 OR6S1Q8NH40 331 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 SECTM1Q8WVN6 248 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 PHB2Q99623 299 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 EPHA6Q9UF33 1036 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 DHDHQ9UQ10 334 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 PCDHGA1Q9Y5H4 931 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 STK17BO94768 372 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 HTR2CP28335 458 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 NPY4RP50391 375 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ELOCQ15369 112 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 LRRK1Q38SD2 2015 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 C1QL3Q5VWW1 255 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 OR51F2Q8NH61 342 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 RSPRY1Q96DX4 576 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 NOTCH4Q99466 2003 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 PQLC2LA1A4F0 135 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 H0Y8X5 98 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 MPZL1O95297 269 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ABOP16442 354 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 GNB3P16520 340 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 RAB6AP20340 208 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 GNALP38405 381 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ADPRHP54922 357 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 PSG6Q00889 435 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 MFGE8Q08431 387 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-209ENST00000576012 SGCGQ13326 291 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 SVIPQ8NHG7 77 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 TSACCQ96A04 125 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-209ENST00000576012 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 IP6K3Q96PC2 410 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 NRIP2Q9BQI9 281 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-209ENST00000576012 COL4A6Q14031 1691 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 HTR3BO95264 441 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 NUDT14O95848 222 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ADH1AP07327 375 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 SFTPBP07988 381 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 HPGDP15428 266 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF44P15621 663 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ITGA3P26006 1051 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 PSMB6P28072 239 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 VITQ6UXI7 678 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF563Q8TA94 476 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 OR5AC2Q9NZP5 309 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 TINAGQ9UJW2 476 aa13.1□□□□□ -0.31
SCARF1-209ENST00000576012 MRPS23Q9Y3D9 190 aaKnown RBP13.1□□□□□ -0.31
SCARF1-209ENST00000576012 A0A1W2PPH5 198 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 OIP5O43482 229 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 HOXB5P09067 269 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 H2AFB1P0C5Y9 115 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 DNASE1L1P49184 302 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 GPR18Q14330 331 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 TMEM31Q5JXX7 168 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 LCN10Q6JVE6 187 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 LYG2Q86SG7 212 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-209ENST00000576012 PITHD1Q9GZP4 211 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-209ENST00000576012 METTL8Q9H825 291 aaKnown RBP13.09□□□□□ -0.31
SCARF1-209ENST00000576012 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
SCARF1-209ENST00000576012 METTL21EPA6NDL7 271 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 COLCA2A8K830 154 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 RNASEK-C17orf49H0YIS7 233 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 H0YIZ8 118 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 HCRTR1O43613 425 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 SNAPC5O75971 98 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF432O94892 652 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 S100A12P80511 92 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 GGTLC2Q14390 218 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 ASPHD2Q6ICH7 369 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 ADAMTSL4Q6UY14 1074 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF765Q7L2R6 523 aa13.09□□□□□ -0.31
SCARF1-209ENST00000576012 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms