RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 SURF4O15260 269 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 DOK2O60496 412 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 SNAP29O95721 258 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 CD8AP01732 235 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 OR4A8P0C604 315 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 GAAP10253 952 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 COX5BP10606 129 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 GLRXP35754 106 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 SELENOVP59797 346 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
LITAF-217ENST00000575426 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
LITAF-217ENST00000575426 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
LITAF-217ENST00000575426 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 MEP1BQ16820 701 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 TMEM236Q5W0B7 351 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 OR51L1Q8NGJ5 315 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 OR6K6Q8NGW6 343 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 PERPQ96FX8 193 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 TVP23BQ9NYZ1 205 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 KCNG2Q9UJ96 466 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
LITAF-217ENST00000575426 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 CCDC168Q8NDH2 2452 aa13.14□□□□□ -0.31
LITAF-217ENST00000575426 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 FAM183AA6NL82 134 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 B9A039 149 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 OVOL3O00110 214 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 MITFO75030 526 aaPredicted RBP13.13□□□□□ -0.31
LITAF-217ENST00000575426 BAG2O95816 211 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 TFP02787 698 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 GYPBP06028 91 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 LCKP06239 509 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 FAM157BP0CG42 384 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 SPI1P17947 270 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 PCSK6P29122 969 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 CDKN1AP38936 164 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 HTR5AP47898 357 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 PTH2RP49190 550 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 UCP2P55851 309 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 ATP5J2P56134 94 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 ADAM8P78325 824 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 ADIPOQQ15848 244 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 IGFBPL1Q8WX77 278 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 POM121L2Q96KW2 1035 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 CACNG6Q9BXT2 260 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 GSX2Q9BZM3 304 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 OR51V1Q9H2C8 321 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 OR51B6Q9H340 312 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 PLK3Q9H4B4 646 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 ELOVL3Q9HB03 270 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
LITAF-217ENST00000575426 LOC100509620A0A075B734 347 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 RER1O15258 196 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 RAB35Q15286 201 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 ELFN2Q5R3F8 820 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 C11orf71Q6IPW1 123 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 RGS7BPQ6MZT1 257 aaPredicted RBP13.12□□□□□ -0.31
LITAF-217ENST00000575426 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
LITAF-217ENST00000575426 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 C1orf174Q8IYL3 243 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
LITAF-217ENST00000575426 OR1F12Q8NHA8 337 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 PITX2Q99697 317 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 CIB1Q99828 191 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 C9orf16Q9BUW7 83 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 CXXC4Q9H2H0 198 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 MED20Q9H944 212 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 ZNF701Q9NV72 531 aaPredicted RBP13.12□□□□□ -0.31
LITAF-217ENST00000575426 LHFPL6Q9Y693 200 aa13.12□□□□□ -0.31
LITAF-217ENST00000575426 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
LITAF-217ENST00000575426 OR6C6A6NF89 314 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 GPRIN2O60269 458 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 GLCEO94923 617 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 ABHD16AO95870 558 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CLUP10909 449 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 PAX1P15863 534 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 ENTPD1P49961 510 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 RAD23AP54725 363 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 PPP2R2BQ00005 443 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 EFNB3Q15768 340 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 SWI5Q1ZZU3 235 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
LITAF-217ENST00000575426 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CORO6Q6QEF8 472 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 CPOQ8IVL8 374 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 ZNF511Q8NB15 262 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 OR1J1Q8NGS3 322 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 PTP4A1Q93096 173 aa13.11□□□□□ -0.31
LITAF-217ENST00000575426 MRPL24Q96A35 216 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms