RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 PABPC1L2AQ5JQF8 200 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 HIST2H3PS2Q5TEC6 136 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 OTPQ5XKR4 325 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 SLC18B1Q6NT16 456 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 B3GLCTQ6Y288 498 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 HIST2H3AQ71DI3 136 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 SLC16A9Q7RTY1 509 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 THAP5Q7Z6K1 395 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 ALDH16A1Q8IZ83 802 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 ZNF75AQ96N20 296 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 ATPIF1Q9UII2 106 aa14.87□□□□□ -0.03
NUP88-210ENST00000574867 IQCMA0A1B0GVH7 501 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 M0R1B8 84 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 SGCEO43556 437 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 SELENOFO60613 162 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 WBP4O75554 376 aaKnown RBP14.86□□□□□ -0.03
NUP88-210ENST00000574867 SERPINA5P05154 406 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 PTAFRP25105 342 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 MTNR1AP48039 350 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 PSG4Q00888 419 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 RAB35Q15286 201 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 LINC00346Q8IVM7 164 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 ZNF454Q8N9F8 522 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 FBLIM1Q8WUP2 373 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 C1QTNF6Q9BXI9 259 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 YIPF3Q9GZM5 350 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 WNT5BQ9H1J7 359 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 Q9H521 79 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 GDF2Q9UK05 429 aaPredicted RBP14.86□□□□□ -0.03
NUP88-210ENST00000574867 IGHV1-18A0A0C4DH31 117 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 DOK2O60496 412 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 MYF6P23409 242 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 NAA10P41227 235 aaPredicted RBP14.86□□□□□ -0.03
NUP88-210ENST00000574867 RAB39AQ14964 217 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 CORO6Q6QEF8 472 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 DPY19L4Q7Z388 723 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 CNIH3Q8TBE1 160 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 MNTQ99583 582 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 HDHD2Q9H0R4 259 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 ADGRL4Q9HBW9 690 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 PLEK2Q9NYT0 353 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 AASSQ9UDR5 926 aa14.86□□□□□ -0.03
NUP88-210ENST00000574867 RPL36Q9Y3U8 105 aaKnown RBP14.86□□□□□ -0.03
NUP88-210ENST00000574867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.85□□□□□ -0.03
NUP88-210ENST00000574867 RER1O15258 196 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 CECR9P0C854 216 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 COX5BP10606 129 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 ZNF91Q05481 1191 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 DCXRQ7Z4W1 244 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 IL17RDQ8NFM7 739 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 OR51G2Q8NGK0 314 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 AKR7LQ8NHP1 331 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 OTOSQ8NHW6 89 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 TMEM14AQ9Y6G1 99 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 DEFB108AA8MXU0 73 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 MRPL3P09001 348 aaKnown RBP14.85□□□□□ -0.03
NUP88-210ENST00000574867 SBK2P0C263 348 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 DBTP11182 482 aaKnown RBP14.85□□□□□ -0.03
NUP88-210ENST00000574867 PSKH1P11801 424 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 CD40P25942 277 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 ATP6V1E1P36543 226 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 RPS27P42677 84 aaKnown RBP14.85□□□□□ -0.03
NUP88-210ENST00000574867 BSPH1Q075Z2 132 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 NCMAPQ5T1S8 102 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 ZNF774Q6NX45 483 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 CFAP77Q6ZQR2 320 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 VASH1Q7L8A9 365 aaPredicted RBP14.85□□□□□ -0.03
NUP88-210ENST00000574867 CDC20BQ86Y33 519 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 ZNF584Q8IVC4 421 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 RNFT2Q96EX2 444 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 PLPPR2Q96GM1 343 aa14.85□□□□□ -0.03
NUP88-210ENST00000574867 PRR14LQ5THK1 2151 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 A6NNC1 897 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 CELA3BP08861 270 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 APLNRP35414 380 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 CDK5R2Q13319 367 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 EIF2B1Q14232 305 aaKnown RBP14.84□□□□□ -0.03
NUP88-210ENST00000574867 TBC1D28Q2M2D7 210 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 CCDC92Q53HC0 331 aaPredicted RBP14.84□□□□□ -0.03
NUP88-210ENST00000574867 ELFN2Q5R3F8 820 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 SLC30A7Q8NEW0 376 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 OR1J2Q8NGS2 313 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 ST7LQ8TDW4 575 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 KCNS3Q9BQ31 491 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 PTPN13Q12923 2485 aa14.84□□□□□ -0.03
NUP88-210ENST00000574867 OR6C6A6NF89 314 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 DPRXA6NFQ7 191 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 PHYHO14832 338 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 SYNGR3O43761 229 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 CRYAAP02489 173 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 LYNP07948 512 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 HTR5AP47898 357 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 NUDT6P53370 316 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 NAAAQ02083 359 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 ECH1Q13011 328 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 RHOUQ7L0Q8 258 aa14.83□□□□□ -0.03
NUP88-210ENST00000574867 MYPOPQ86VE0 399 aaPredicted RBP14.83□□□□□ -0.03
NUP88-210ENST00000574867 CPEB3Q8NE35 698 aaKnown RBP14.83□□□□□ -0.03
NUP88-210ENST00000574867 OR1F12Q8NHA8 337 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms