RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 N6AMT1Q9Y5N5 214 aa12.51□□□□□ -0.41
VPS33B-208ENST00000574755 TRAV6A0A075B6T7 132 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF726A6NNF4 738 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 PMS2P2O95744 297 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ITGA5P08648 1049 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 GIFP27352 417 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 SCAND1P57086 179 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 SNTB2Q13425 540 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 TOMM20Q15388 145 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF239Q16600 458 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ASPHD2Q6ICH7 369 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 PLPP7Q8NBV4 271 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 CDV3Q9UKY7 258 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 GPR179Q6PRD1 2367 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 PHF3Q92576 2039 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 GABARAPH6UMI1 98 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ISG15P05161 165 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 CDAP32320 146 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 PTH2RP49190 550 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 GPR85P60893 370 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 Q0VFX4 171 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 MFAP5Q13361 173 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 KLF9Q13886 244 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 SSPNQ14714 243 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 BCL2L15Q5TBC7 163 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF704Q6ZNC4 412 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 FCAMRQ8WWV6 532 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 SGCZQ96LD1 299 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 C7orf50Q9BRJ6 194 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 EMC7Q9NPA0 242 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
VPS33B-208ENST00000574755 FARSAQ9Y285 508 aaKnown RBP12.5□□□□□ -0.41
VPS33B-208ENST00000574755 SULT1B1O43704 296 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 ZIC3O60481 467 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CBR3O75828 277 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 MT-ND4P03905 459 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 TCRBP04435 133 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 TMIGD3P0DMS9 266 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 DNASE1L1P49184 302 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 MMP16P51512 607 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 BTG1P62324 171 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 PLA2G7Q13093 441 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 B3GNTL1Q67FW5 361 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF486Q96H40 463 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 DDA1Q9BW61 102 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CACNG6Q9BXT2 260 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 LOC102725191A0A1B0GVB3 256 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 KRT33AO76009 404 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 DHFRP00374 187 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 HPP00738 406 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 P04436 131 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 QDPRP09417 244 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 PTHLHP12272 177 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CD59P13987 128 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 ACHEP22303 614 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CFPP27918 469 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CCR6P51684 374 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CLDN17P56750 224 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 TAS2R20P59543 309 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 H3F3AP84243 136 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 RAB11BQ15907 218 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 OR2AJ1Q8NGZ0 328 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 TMEM41AQ96HV5 264 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 COPZ2Q9P299 210 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 KLK11Q9UBX7 282 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 GDF2Q9UK05 429 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-208ENST00000574755 RCE1Q9Y256 329 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 NUBP2Q9Y5Y2 271 aa12.49□□□□□ -0.41
VPS33B-208ENST00000574755 IGHV3-15A0A0B4J1V0 119 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 C9orf172C9J069 976 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 P2RY10O00398 339 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 SLC17A2O00624 439 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 TLX3O43711 291 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 FSTP19883 344 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 POU3F4P49335 361 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 CHAF1BQ13112 559 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 GLT8D1Q68CQ7 371 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 SLC25A47Q6Q0C1 308 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 C15orf40Q8WUR7 153 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms