RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MRPS21P82921 87 aaKnown RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 NKPD1Q17RQ9 610 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 JMJD6Q6NYC1 403 aaPredicted RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 KCNRGQ8N5I3 272 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 OR4S1Q8NGB4 309 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 SLC6A7Q99884 636 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 DNTTIP1Q9H147 329 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 TXNIPQ9H3M7 391 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 TAS2R3Q9NYW6 316 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 COMMD9Q9P000 198 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 A0A1B0GTI1 187 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 FITM1A5D6W6 292 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 TMEM235A6NFC5 223 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 MPZL1O95297 269 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 MT-ATP6P00846 226 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 LUMP51884 338 aaPredicted RBP14.04□□□□□ -0.16
NUP88-207ENST00000573584 LRFN4Q6PJG9 635 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 CD163Q86VB7 1156 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 IQCF2Q8IXL9 164 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 OR13C3Q8NGS6 347 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 OR13C8Q8NGS7 320 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 ADIPOR1Q96A54 375 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 ZBTB8AQ96BR9 441 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 EDEM2Q9BV94 578 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 B3GNT4Q9C0J1 378 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 VSX1Q9NZR4 365 aaPredicted RBP14.04□□□□□ -0.16
NUP88-207ENST00000573584 KLK13Q9UKR3 277 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 HHLA2Q9UM44 414 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 EMC9Q9Y3B6 208 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 HRH3Q9Y5N1 445 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 MEGF11A6BM72 1044 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 H0YIG0 161 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 SIGLEC5O15389 551 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 CD74P04233 296 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 LIPCP11150 499 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 GP1BBP13224 206 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 FSTP19883 344 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 SIGLEC14Q08ET2 396 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 SQSTM1Q13501 440 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 ELP2Q6IA86 826 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 C11orf87Q6NUJ2 197 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 ZNF584Q8IVC4 421 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 TSLPQ969D9 159 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 LANCL2Q9NS86 450 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 PIAS3Q9Y6X2 628 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 NUP210LQ5VU65 1888 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 TMEM150CB9EJG8 249 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 CCSO14618 274 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 OR2F2O95006 317 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 WDPCPO95876 746 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 DRD1P21728 446 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 CAPZBP47756 277 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 DEFA5Q01523 94 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 OR2F1Q13607 317 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 LPCAT3Q6P1A2 487 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 PAPD4Q6PIY7 484 aaKnown RBP14.04□□□□□ -0.16
NUP88-207ENST00000573584 OR52N5Q8NH56 324 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 NKD1Q969G9 470 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 ZNF285Q96NJ3 590 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 VRK1Q99986 396 aaPredicted RBP14.04□□□□□ -0.16
NUP88-207ENST00000573584 TBL1XR1Q9BZK7 514 aa14.04□□□□□ -0.16
NUP88-207ENST00000573584 COA3Q9Y2R0 106 aaPredicted RBP14.04□□□□□ -0.16
NUP88-207ENST00000573584 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 LOC100509620A0A075B734 347 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 LDLRAD4O15165 306 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 PGCP20142 388 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 OR1D4P47884 311 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 GABRA4P48169 554 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 GLO1Q04760 184 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ATXN7L3Q14CW9 347 aaPredicted RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 MOB3CQ70IA8 216 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ESX1Q8N693 406 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ACBD4Q8NC06 268 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 FAM174AQ8TBP5 190 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ZNF75AQ96N20 296 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ZNF471Q9BX82 626 aaPredicted RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 BARX1Q9HBU1 254 aaPredicted RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 ATG2AQ2TAZ0 1938 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 A0A0A6YYH2 397 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 A6NJ64 397 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 DISC1C4P0D8 188 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 DXOO77932 396 aaKnown RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 IGKV3-11P04433 115 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 CD37P11049 281 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ICAM2P13598 275 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 IL32P24001 234 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 CXADRP78310 365 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ZNF345Q14585 488 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 CDNFQ49AH0 187 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 C3orf33Q6P1S2 294 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 FBXO46Q6PJ61 603 aaPredicted RBP14.03□□□□□ -0.16
NUP88-207ENST00000573584 PPP1R1CQ8WVI7 109 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 LRRC46Q96FV0 321 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 LRRC61Q9BV99 259 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 NUDT9Q9BW91 350 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 IFT46Q9NQC8 304 aa14.03□□□□□ -0.16
NUP88-207ENST00000573584 ZNF107Q9UII5 783 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms