RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 CGGBP1Q9UFW8 167 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-211ENST00000572174 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 CELSR1Q9NYQ6 3014 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 C5orf49A4QMS7 147 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 OR6C6A6NF89 314 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 G3V2T6 193 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 ICMTO60725 284 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 LCKP06239 509 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 ZNF23P17027 643 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 CCNOP22674 350 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 GCH1P30793 250 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 HTR5AP47898 357 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 RGS6P49758 472 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 SLC25A1P53007 311 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 UCP2P55851 309 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-211ENST00000572174 ECH1Q13011 328 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 CLEC12BQ2HXU8 276 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 SLC35F1Q5T1Q4 408 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 OR6V1Q8N148 313 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 PARP8Q8N3A8 854 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 WFDC11Q8NEX6 87 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 SLC26A10Q8NG04 563 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 OR8D4Q8NGM9 314 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 AKR7LQ8NHP1 331 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 NEU4Q8WWR8 484 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-211ENST00000572174 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 PLEKHA8Q96JA3 519 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 DCLRE1CQ96SD1 692 aaKnown RBP12.03□□□□□ -0.48
RPAIN-211ENST00000572174 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 WNT5BQ9H1J7 359 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
RPAIN-211ENST00000572174 EMC7Q9NPA0 242 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
RPAIN-211ENST00000572174 ASH2LQ9UBL3 628 aa12.03□□□□□ -0.48
RPAIN-211ENST00000572174 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 OR6C68A6NDL8 312 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ABHD16AO95870 558 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 IGHV4-39P01824 125 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 GAAP10253 952 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 FMO3P31513 532 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 LIPAP38571 399 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ERFP50548 548 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ACTR3P61158 418 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ESRRGP62508 458 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 TEKQ02763 1124 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF718Q3SXZ3 478 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF774Q6NX45 483 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 KRTAP1-3Q8IUG1 177 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 CPEB3Q8NE35 698 aaKnown RBP12.02□□□□□ -0.49
RPAIN-211ENST00000572174 SYNPRQ8TBG9 265 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.49
RPAIN-211ENST00000572174 C18orf12Q96KH6 178 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 COQ7Q99807 217 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-211ENST00000572174 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.49
RPAIN-211ENST00000572174 HIVEP1P15822 2718 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 NDUFS8O00217 210 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 GPRIN2O60269 458 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-211ENST00000572174 FAM157BP0CG42 384 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF250P15622 560 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 POU1F1P28069 291 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 CCNIQ14094 377 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 MST1LQ2TV78 715 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 FAM209AQ5JX71 171 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 ELFN2Q5R3F8 820 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 FAHD1Q6P587 224 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 VASH1Q7L8A9 365 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-211ENST00000572174 TMEM179BQ7Z7N9 219 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 SLC37A3Q8NCC5 494 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 ICA1LQ8NDH6 482 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 ABHD4Q8TB40 342 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 CENPNQ96H22 339 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-211ENST00000572174 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 DOK1Q99704 481 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 RBM4Q9BWF3 364 aaKnown RBP12.01□□□□□ -0.49
RPAIN-211ENST00000572174 GABARAPL1Q9H0R8 117 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 CYSLTR2Q9NS75 346 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 KRT84Q9NSB2 600 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 REV1Q9UBZ9 1251 aa12.01□□□□□ -0.49
RPAIN-211ENST00000572174 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-211ENST00000572174 CR1P17927 2039 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 IGLV3-9A0A075B6K5 115 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 PLSCR5A0PG75 271 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 PRR23D1E9PI22 279 aaPredicted RBP12□□□□□ -0.49
RPAIN-211ENST00000572174 DCTN6O00399 190 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 SSX4O60224 188 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 TP53P04637 393 aaPredicted RBP12□□□□□ -0.49
RPAIN-211ENST00000572174 PRR23D2P0DMB1 279 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms