RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MAP6Q96JE9 813 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 RAB3IPQ96QF0 476 aaPredicted RBP6.02□□□□□ -1.45
SMG6-209ENST00000571442 SLC29A1Q99808 456 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 BDH2Q9BUT1 245 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 OSBPL10Q9BXB5 764 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 CXXC4Q9H2H0 198 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 WDR76Q9H967 626 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 SLC25A19Q9HC21 320 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 CCNB1IP1Q9NPC3 277 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 PNRC2Q9NPJ4 139 aaKnown RBP6.02□□□□□ -1.45
SMG6-209ENST00000571442 CA10Q9NS85 328 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 ASH2LQ9UBL3 628 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 POU2F3Q9UKI9 436 aa6.02□□□□□ -1.45
SMG6-209ENST00000571442 OR6C6A6NF89 314 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZAR1LA6NP61 321 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 EI24O14681 340 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 PRKYO43930 277 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 DOK2O60496 412 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SMPD2O60906 423 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 LY6HO94772 140 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CLPTM1O96005 669 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 NGFP01138 241 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CRYAAP02489 173 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 OR4A8P0C604 315 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 FCGR1AP12314 374 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 NR2C1P13056 603 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CCNOP22674 350 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SLC2A5P22732 501 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 STOMP27105 288 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CRABP1P29762 137 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 APOBEC3AP31941 199 aaPredicted RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 PTH2RP49190 550 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SLC25A1P53007 311 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 LSM6P62312 80 aaKnown RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 EFNB1P98172 346 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 HNRNPA0Q13151 305 aaKnown RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 DAG1Q14118 895 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 KRTAP27-1Q3LI81 207 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SLX4IPQ5VYV7 408 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 C12orf73Q69YU5 71 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SLC18B1Q6NT16 456 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZFP1Q6P2D0 407 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 PLBD1Q6P4A8 553 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 RFPL4BQ6ZWI9 263 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZDHHC13Q8IUH4 622 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CPOQ8IVL8 374 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZCCHC24Q8N2G6 241 aaKnown RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 PQLC1Q8N2U9 271 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 MUC15Q8N387 334 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 SVOPLQ8N434 492 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 WFDC11Q8NEX6 87 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 PROKR2Q8NFJ6 384 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 GTF3AQ92664 365 aaKnown RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 AMELYQ99218 206 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 DOK1Q99704 481 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 FOXC2Q99958 501 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CACNG6Q9BXT2 260 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 MRPL37Q9BZE1 423 aaKnown RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZNF556Q9HAH1 456 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 KRT84Q9NSB2 600 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 CBLN4Q9NTU7 201 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ZNF701Q9NV72 531 aaPredicted RBP6.01□□□□□ -1.45
SMG6-209ENST00000571442 TVP23BQ9NYZ1 205 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 KIF17Q9P2E2 1029 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 KLHL21Q9UJP4 597 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 BAIAP2Q9UQB8 552 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 TIMM10BQ9Y5J6 103 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 COMMD3-BMI1R4GMX3 469 aa6.01□□□□□ -1.45
SMG6-209ENST00000571442 ANK3Q12955 4377 aaKnown RBP6□□□□□ -1.45
SMG6-209ENST00000571442 IQCMA0A1B0GVH7 501 aa6□□□□□ -1.45
SMG6-209ENST00000571442 C5orf49A4QMS7 147 aa6□□□□□ -1.45
SMG6-209ENST00000571442 RIIAD1A6NNX1 92 aa6□□□□□ -1.45
SMG6-209ENST00000571442 C12orf71A8MTZ7 269 aa6□□□□□ -1.45
SMG6-209ENST00000571442 PRR32B1ATL7 298 aa6□□□□□ -1.45
SMG6-209ENST00000571442 DLGAP1O14490 977 aa6□□□□□ -1.45
SMG6-209ENST00000571442 SGCEO43556 437 aa6□□□□□ -1.45
SMG6-209ENST00000571442 SELENOFO60613 162 aa6□□□□□ -1.45
SMG6-209ENST00000571442 SNAP29O95721 258 aa6□□□□□ -1.45
SMG6-209ENST00000571442 IGHV4-39P01824 125 aa6□□□□□ -1.45
SMG6-209ENST00000571442 ALPLP05186 524 aa6□□□□□ -1.45
SMG6-209ENST00000571442 PAX1P15863 534 aa6□□□□□ -1.45
SMG6-209ENST00000571442 ZNF3P17036 446 aa6□□□□□ -1.45
SMG6-209ENST00000571442 PAX7P23759 505 aa6□□□□□ -1.45
SMG6-209ENST00000571442 IGFBP5P24593 272 aa6□□□□□ -1.45
SMG6-209ENST00000571442 APLNRP35414 380 aa6□□□□□ -1.45
SMG6-209ENST00000571442 GLRXP35754 106 aa6□□□□□ -1.45
SMG6-209ENST00000571442 SERPINF1P36955 418 aa6□□□□□ -1.45
SMG6-209ENST00000571442 RBMXP38159 391 aaKnown RBP6□□□□□ -1.45
SMG6-209ENST00000571442 MPV17P39210 176 aa6□□□□□ -1.45
SMG6-209ENST00000571442 HTR5AP47898 357 aa6□□□□□ -1.45
SMG6-209ENST00000571442 ARHGDIAP52565 204 aa6□□□□□ -1.45
SMG6-209ENST00000571442 HCCSP53701 268 aa6□□□□□ -1.45
SMG6-209ENST00000571442 PRSS12P56730 875 aa6□□□□□ -1.45
SMG6-209ENST00000571442 ADAM8P78325 824 aa6□□□□□ -1.45
SMG6-209ENST00000571442 GLO1Q04760 184 aa6□□□□□ -1.45
SMG6-209ENST00000571442 SCRN3Q0VDG4 424 aa6□□□□□ -1.45
SMG6-209ENST00000571442 AQP6Q13520 282 aa6□□□□□ -1.45
SMG6-209ENST00000571442 MAD2L1BPQ15013 274 aaPredicted RBP6□□□□□ -1.45
SMG6-209ENST00000571442 PCK2Q16822 640 aa6□□□□□ -1.45
SMG6-209ENST00000571442 TBC1D28Q2M2D7 210 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms