RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR4S1Q8NGB4 309 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 SMIM8Q96KF7 97 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 OR2A5Q96R48 311 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
SMG6-207ENST00000570756 MIOXQ9UGB7 285 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 TMED7Q9Y3B3 224 aa13.9□□□□□ -0.18
SMG6-207ENST00000570756 KCNAB3O43448 404 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 IGKV1D-16P01601 117 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 PPT1P50897 306 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 TAS2R31P59538 309 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 GPR18Q14330 331 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 ZNF585AQ6P3V2 769 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 PTX4Q96A99 478 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 KXD1Q9BQD3 176 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 ZMAT3Q9HA38 289 aaKnown RBP13.89□□□□□ -0.19
SMG6-207ENST00000570756 ELOVL3Q9HB03 270 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 MEGF11A6BM72 1044 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 TMEM235A6NFC5 223 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 PRR19A6NJB7 356 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 WRBO00258 174 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 MT-ND4LP03901 98 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 ERCC1P07992 297 aaPredicted RBP13.89□□□□□ -0.19
SMG6-207ENST00000570756 ZNF44P15621 663 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 SERPINF1P36955 418 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 SLC6A9P48067 706 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 RBM39Q14498 530 aaKnown RBP13.89□□□□□ -0.19
SMG6-207ENST00000570756 ZNF74Q16587 644 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 LRRC75AQ8NAA5 344 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 OTOSQ8NHW6 89 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 PHOSPHO1Q8TCT1 267 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 ADAMTS17Q8TE56 1095 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 OR8B4Q96RC9 309 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 DEC1Q9P2X7 70 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 GTF2A1LQ9UNN4 478 aa13.89□□□□□ -0.19
SMG6-207ENST00000570756 MYO9BQ13459 2157 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 METTL21EPA6NDL7 271 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 DBX1A6NMT0 343 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 MFNGO00587 321 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 OR10H2O60403 315 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 PNMTP11086 282 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 AKR1C4P17516 323 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 FSTP19883 344 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 HMGN3Q15651 99 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 CNKSR3Q6P9H4 555 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ETFBKMTQ8IXQ9 262 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ZSCAN4Q8NAM6 433 aaPredicted RBP13.88□□□□□ -0.19
SMG6-207ENST00000570756 TMEM52Q8NDY8 209 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 OR4N2Q8NGD1 307 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ASB17Q8WXJ9 295 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ZC3H10Q96K80 434 aaKnown RBP13.88□□□□□ -0.19
SMG6-207ENST00000570756 CMKLR1Q99788 373 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 G6PC3Q9BUM1 346 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 NUDT9Q9BW91 350 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 PCDHGA1Q9Y5H4 931 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 POMT1Q9Y6A1 747 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 IGKV1D-42A0A075B6H8 117 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 H7C1C5 153 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 CYR61O00622 381 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 CEACAM5P06731 702 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 FOSL1P15407 271 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 RPS27P42677 84 aaKnown RBP13.88□□□□□ -0.19
SMG6-207ENST00000570756 F2RL1P55085 397 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 LCN6P62502 163 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 FABP9Q0Z7S8 132 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 SLC17A1Q14916 467 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ASPHD2Q6ICH7 369 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 LRRC69Q6ZNQ3 347 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 TAF8Q7Z7C8 310 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ZNF440Q8IYI8 595 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 FAM174AQ8TBP5 190 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 HIST1H2BAQ96A08 127 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 ZNF285Q96NJ3 590 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 RNF126Q9BV68 326 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
SMG6-207ENST00000570756 MRPS33Q9Y291 106 aaKnown RBP13.88□□□□□ -0.19
SMG6-207ENST00000570756 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
SMG6-207ENST00000570756 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 MUC22E2RYF6 1773 aaPredicted RBP13.87□□□□□ -0.19
SMG6-207ENST00000570756 SPTBN5Q9NRC6 3674 aaKnown RBP13.87□□□□□ -0.19
SMG6-207ENST00000570756 LTBP2Q14767 1821 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 SERINC4A6NH21 518 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 NPIPB9F8W1W9 429 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 EFSO43281 561 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 MBTPS2O43462 519 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 HTR3BO95264 441 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 F13BP05160 661 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 ZNF14P17017 642 aaPredicted RBP13.87□□□□□ -0.19
SMG6-207ENST00000570756 RCC1P18754 421 aaPredicted RBP13.87□□□□□ -0.19
SMG6-207ENST00000570756 AGAP20933 346 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 CPT2P23786 658 aa13.87□□□□□ -0.19
SMG6-207ENST00000570756 CCINQ13939 588 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms