RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF433Q8N7K0 673 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 NANOGP1Q8N7R0 232 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 RELL2Q8NC24 303 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 OR52N1Q8NH53 320 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 ST7LQ8TDW4 575 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 FCGR1BQ92637 280 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 RORBQ92753 470 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 BCL2L2Q92843 193 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 C1orf198Q9H425 327 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 J3QLW9 94 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 PSMD9O00233 223 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 RER1O15258 196 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 MAGEB4O15481 346 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 LRRTM2O43300 516 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 WNT11O96014 354 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 MT-ND5P03915 603 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 KRT8P05787 483 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF19P17023 458 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 PSMB9P28065 219 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 HOXC12P31275 282 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 WNT4P56705 351 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 PCBD1P61457 104 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 SCRN3Q0VDG4 424 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 MED22Q15528 200 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 TSC22D1Q15714 1073 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 CFAP77Q6ZQR2 320 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 PLEKHG7Q6ZR37 379 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 KRT77Q7Z794 578 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 SPRYD4Q8WW59 207 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 NANOS1Q8WY41 292 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 SLAMF6Q96DU3 332 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 FBXO17Q96EF6 278 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 C4orf36Q96KX1 117 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 OR8B4Q96RC9 309 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 SLCO1C1Q9NYB5 712 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 GNG8Q9UK08 70 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 FREM1Q5H8C1 2179 aa13.5□□□□□ -0.25
HERPUD1-219ENST00000570273 METTL15A6NJ78 407 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 A8MXE2 369 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 PATE4P0C8F1 98 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF32P17041 273 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 IL32P24001 234 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 CHRNB4P30926 498 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 OR12D2P58182 307 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 TUBA1BP68363 451 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 ADORA2A-AS1P86434 159 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 EGR3Q06889 387 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 GABRA6Q16445 453 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 SLC36A2Q495M3 483 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 C4orf17Q53FE4 359 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 UBE2UQ5VVX9 321 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 XAF1Q6GPH4 301 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 MTFR2Q6P444 385 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 TUBA1AQ71U36 451 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 SYS1Q8N2H4 156 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 GJC3Q8NFK1 279 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 GATAD2BQ8WXI9 593 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 MUL1Q969V5 352 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 RNF121Q9H920 327 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 COQ3Q9NZJ6 369 aa13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-219ENST00000570273 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 DOK2O60496 412 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 INMTO95050 263 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 UBL3O95164 117 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 HLA-HP01893 362 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 H2BFMP0C1H6 154 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 HSMCR30P0CW71 290 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 CD79AP11912 226 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 NR1H2P55055 460 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 ROM1Q03395 351 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 RAB35Q15286 201 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 SPHARQ15513 63 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 TAF13Q15543 124 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 SFRP5Q5T4F7 317 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 OR7E24Q6IFN5 339 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 TMEM53Q6P2H8 277 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 SYT9Q86SS6 491 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 FGFBP3Q8TAT2 258 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 ASB5Q8WWX0 329 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms