RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PCGF2P35227 344 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 RPL3P39023 403 aaKnown RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 FRKP42685 505 aaPredicted RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 SERPINB8P50452 374 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 PKNOX1P55347 436 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 SH3BGRP55822 239 aaPredicted RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 IMPG1Q17R60 797 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 NDUFAF6Q330K2 333 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 DCST2Q5T1A1 773 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 TMEM225Q6GV28 225 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 NOXRED1Q6NXP6 359 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 LEG1Q6P5S2 330 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 ZIC4Q8N9L1 334 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF563Q8TA94 476 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 YIPF5Q969M3 257 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 DDIT4LQ96D03 193 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 EGLN2Q96KS0 407 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF382Q96SR6 550 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 CITED1Q99966 193 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 CCDC106Q9BWC9 280 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 TEX12Q9BXU0 123 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 RBM38Q9H0Z9 239 aaKnown RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 CRLF2Q9HC73 371 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 CTPS2Q9NRF8 586 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 OPN4Q9UHM6 478 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 ZDHHC2Q9UIJ5 367 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF346Q9UL40 294 aaKnown RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 SNX12Q9UMY4 172 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 FAF1Q9UNN5 650 aaPredicted RBP5.02□□□□□ -1.61
UBFD1-209ENST00000569919 TIMM22Q9Y584 194 aa5.02□□□□□ -1.61
UBFD1-209ENST00000569919 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 A8MT66 165 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 H3BNX3 289 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 CCDC188H7C350 402 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF208O43345 1280 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SEC22BO75396 215 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 RP2O75695 350 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 LGI1O95970 557 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TCP1P17987 556 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TAC1P20366 129 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 IMPDH1P20839 514 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 OMGP23515 440 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 GLRXP35754 106 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 CRYBB2P43320 205 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 MAGEA4P43358 317 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ASMTP46597 345 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 CCT3P49368 545 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ATP4BP51164 291 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 MRPS34P82930 218 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ROR2Q01974 943 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SKP2Q13309 424 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SNTB2Q13425 540 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 PCLAFQ15004 111 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SLC9A3R2Q15599 337 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TWIST1Q15672 202 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF141Q15928 474 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TAF9Q16594 264 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 UNC50Q53HI1 259 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ARMCX4Q5H9R4 360 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ZNF678Q5SXM1 525 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TEX35Q5T0J7 233 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 PDZK1Q5T2W1 519 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 OLFML2AQ68BL7 652 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TYW3Q6IPR3 259 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 KRT80Q6KB66 452 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 PAQR6Q6TCH4 344 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SYT10Q6XYQ8 523 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 EIF3MQ7L2H7 374 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 GRINAQ7Z429 371 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 LINC00346Q8IVM7 164 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 CNPY4Q8N129 248 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 KIR3DL3Q8N743 410 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 OR4F5Q8NH21 305 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 DCAKDQ8WVC6 231 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 RAB1CQ92928 201 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 RAB8BQ92930 207 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 CIDECQ96AQ7 238 aaPredicted RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 PPCDCQ96CD2 204 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 MTERF3Q96E29 417 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 OTUB1Q96FW1 271 aaPredicted RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TIMD4Q96H15 378 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 C1orf147Q96MC9 270 aaPredicted RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 SDF2Q99470 211 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 RBM4BQ9BQ04 359 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 MRPL37Q9BZE1 423 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 LINC00470Q9BZP3 86 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 NMUR2Q9GZQ4 415 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 HRH4Q9H3N8 390 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 REEP4Q9H6H4 257 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 NOX3Q9HBY0 568 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 RRAGDQ9NQL2 400 aaPredicted RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 ZCCHC3Q9NUD5 404 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 MRPL15Q9P015 296 aaKnown RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 PPP2R2CQ9Y2T4 447 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 POLR3HQ9Y535 204 aaPredicted RBP5.01□□□□□ -1.61
UBFD1-209ENST00000569919 AUP1Q9Y679 476 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 NBEAL2Q6ZNJ1 2754 aa5.01□□□□□ -1.61
UBFD1-209ENST00000569919 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms