RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, human

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USB1-215	ENST00000569252	NABP1	Q96AH0	204 aa		13.99	□□□□□ -0.17
USB1-215	ENST00000569252	C14orf79	Q96F83	325 aa		13.99	□□□□□ -0.17
USB1-215	ENST00000569252	ZNF582	Q96NG8	517 aa	Predicted RBP	13.99	□□□□□ -0.17
USB1-215	ENST00000569252	C1QTNF6	Q9BXI9	259 aa		13.99	□□□□□ -0.17
USB1-215	ENST00000569252	ESRP2	Q9H6T0	727 aa	Known RBP	13.99	□□□□□ -0.17
USB1-215	ENST00000569252	RPL36	Q9Y3U8	105 aa	Known RBP	13.99	□□□□□ -0.17
USB1-215	ENST00000569252	SLC25A15	Q9Y619	301 aa		13.99	□□□□□ -0.17
USB1-215	ENST00000569252		M0R1B8	84 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TF	P02787	698 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	GAA	P10253	952 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	ZNF83	P51522	516 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	ART1	P52961	327 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TUBA1B	P68363	451 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TUBA4A	P68366	448 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	MEP1B	Q16820	701 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	UGT2A3	Q6UWM9	527 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TMEM108	Q6UXF1	575 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TUBA1A	Q71U36	451 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.98	□□□□□ -0.17
USB1-215	ENST00000569252	MDP1	Q86V88	176 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	IL17RD	Q8NFM7	739 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	OR1J2	Q8NGS2	313 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	HTRA1	Q92743	480 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	MYCBP	Q99417	103 aa	Predicted RBP	13.98	□□□□□ -0.17
USB1-215	ENST00000569252	CNN2	Q99439	309 aa	Known RBP	13.98	□□□□□ -0.17
USB1-215	ENST00000569252	CRIM1	Q9NZV1	1036 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	ASH2L	Q9UBL3	628 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	TMEM14A	Q9Y6G1	99 aa		13.98	□□□□□ -0.17
USB1-215	ENST00000569252	SCG5	P05408	212 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	PATE4	P0C8F1	98 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ZNF32	P17041	273 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	SLC2A5	P22732	501 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	CCKAR	P32238	428 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	APLNR	P35414	380 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	MTNR1A	P48039	350 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ISL1	P61371	349 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.97	□□□□□ -0.17
USB1-215	ENST00000569252	TAF13	Q15543	124 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	KLHL22	Q53GT1	634 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	TEX30	Q5JUR7	227 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	KRT80	Q6KB66	452 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	SLC16A9	Q7RTY1	509 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	FAM169B	Q8N8A8	192 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ZNF454	Q8N9F8	522 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ACBD4	Q8NC06	268 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	OR6N2	Q8NGY6	317 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ZNRF4	Q8WWF5	429 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	FBXO17	Q96EF6	278 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	C1orf198	Q9H425	327 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	WDR76	Q9H967	626 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	MRPL22	Q9NWU5	206 aa	Known RBP	13.97	□□□□□ -0.17
USB1-215	ENST00000569252	B3GNT2	Q9NY97	397 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	HAO2	Q9NYQ3	351 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	PLEK2	Q9NYT0	353 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	KCNN3	Q9UGI6	736 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	LAMP5	Q9UJQ1	280 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	PCDHGB1	Q9Y5G3	927 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	FREM1	Q5H8C1	2179 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	ALPK2	Q86TB3	2170 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	VPS13C	Q709C8	3753 aa		13.97	□□□□□ -0.17
USB1-215	ENST00000569252	IRGM	A1A4Y4	181 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	SGCE	O43556	437 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	MRPL3	P09001	348 aa	Known RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	GNAO1	P09471	354 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	HOXB4	P17483	251 aa	Predicted RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	PTAFR	P25105	342 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	IDH3G	P51553	393 aa	Predicted RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	NR1H2	P55055	460 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	CSNK2B	P67870	215 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	DBP	Q10586	325 aa	Predicted RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	CDK5R2	Q13319	367 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	EIF2B1	Q14232	305 aa	Known RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	ENDOG	Q14249	297 aa	Known RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	C3orf36	Q3SXR2	165 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	BEX5	Q5H9J7	111 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	PABPC1L2A	Q5JQF8	200 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	LINC01590	Q5TEZ4	76 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	SLC18B1	Q6NT16	456 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	TMEM154	Q6P9G4	183 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	ARL9	Q6T311	187 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	B3GLCT	Q6Y288	498 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.96	□□□□□ -0.17
USB1-215	ENST00000569252	OR51G2	Q8NGK0	314 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	THEM6	Q8WUY1	208 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	RNFT2	Q96EX2	444 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	CNBD2	Q96M20	576 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	MNT	Q99583	582 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	YIPF3	Q9GZM5	350 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	LIME1	Q9H400	295 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	CYB5R1	Q9UHQ9	305 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	SPEF1	Q9Y4P9	236 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	COMMD3-BMI1	R4GMX3	469 aa		13.96	□□□□□ -0.17
USB1-215	ENST00000569252	PHYH	O14832	338 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	CRYAA	P02489	173 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	SERPINA5	P05154	406 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	THBD	P07204	575 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	IGFBP2	P18065	325 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	GABRB1	P18505	474 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	CRYGS	P22914	178 aa		13.95	□□□□□ -0.18
USB1-215	ENST00000569252	MYF6	P23409	242 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms